| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Clim_1614 |
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| Symbol | |
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| ID | 6354488 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium limicola DSM 245 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010803 |
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| Strand | - |
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| Start bp | 1747714 |
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| End bp | 1748790 |
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| Gene Length | 1077 bp |
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| Protein Length | 358 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 642669215 |
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| Product | efflux transporter, RND family, MFP subunit |
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| Protein accession | YP_001943637 |
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| Protein GI | 189347108 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATAAAAC CGAAAAAAAT TCCGGTTATT TTTCTGCTCC TTGCCGTTGG ATCAATAGTG
TTCTGGTGGT ATCAGCAGAG GAACAGGCCG GTTGAGCAGG ATTCCTCCTA TCAGCGGGAG
ATGCCGGTAA TAGCCGTTCA GGCTGTCGTT TCTGCGATTC GGGACAGTAT TGCCGTAACG
GGTACGGCAG AAGCCTTCAG GGATGTGGAA ATCTTTTCGG AAACCAGGGG ACTGGTCAGA
AAGGTCCAGG TCGAGGTTGG TGATCGAAAA GCCGCAGGGG CTGTGCTCTA TATCGTCGAT
GACGAACTGC AGAGGACTTT ATTTGAAAAG GCAGAAGCCT CTTTCGAAAA AGCTGCTCTC
GATAATGTTC GTTATGAAAA TCTGCACCGG GAGGGAGCTG TCGCGCTATC CGCTCTCGAG
TCGGTACGAC TGAAACGTGA AGAGGCGGAA GCTGATATGA TAGAAGCTCG CAGAAATCTT
CGGAATACCA GGATAAAAAC TCCTGTTTCC GGTACGGTCA CCGAGAAGAT TGTCGATGAG
GGCGAAATGG TTCAACCAGG CATGAGGGTT GCCAACCTCG TTGATCTTTC GCGTTTGCGC
ATAACGTTTT TTCTCTCCGA AAAAGAGGTT TCGACTATAC TTCCAGGGTA TCCGGTAAGG
GTTATCAGCG ATCAGCACCC CGGAAAGACC CTGAAAGGCA GGGTGAGTTC GATAAGCGGC
AAGGCCGGCA TGGACCGTTC GTATGCAGCA GAAGCGGTTC TCCGGAATAG TACGGATTTT
CCGTTAAGGG CAGGGATGTT TGTCCGGGTC ATCCTTTCGG GAGAGGAATC GCGGGAAGCG
CTTATGATTC CAAGAACCGC ACTTGCCGGA AGTATCATGA ACCCTGAAGT CTATGTGGTT
CACAAGGGGG TTGCCCGACT TCGGCAGATC GCTGCAGGGA AGGAGTATGG CGACATGCTC
GAGATTCTTC AGGGTGTCGC TGCAGGTGAA CTTGTTGTGA CGAGCGGTCA GCATGAACTA
CGTGACGGGA TGAAGGTCAG GCTTGTTCCG CAGAAAAAAA CGGAAAGCGT ACGATGA
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| Protein sequence | MIKPKKIPVI FLLLAVGSIV FWWYQQRNRP VEQDSSYQRE MPVIAVQAVV SAIRDSIAVT
GTAEAFRDVE IFSETRGLVR KVQVEVGDRK AAGAVLYIVD DELQRTLFEK AEASFEKAAL
DNVRYENLHR EGAVALSALE SVRLKREEAE ADMIEARRNL RNTRIKTPVS GTVTEKIVDE
GEMVQPGMRV ANLVDLSRLR ITFFLSEKEV STILPGYPVR VISDQHPGKT LKGRVSSISG
KAGMDRSYAA EAVLRNSTDF PLRAGMFVRV ILSGEESREA LMIPRTALAG SIMNPEVYVV
HKGVARLRQI AAGKEYGDML EILQGVAAGE LVVTSGQHEL RDGMKVRLVP QKKTESVR
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