| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Clim_1457 |
|---|
| Symbol | |
|---|
| ID | 6354770 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium limicola DSM 245 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010803 |
|---|
| Strand | - |
|---|
| Start bp | 1563525 |
|---|
| End bp | 1563932 |
|---|
| Gene Length | 408 bp |
|---|
| Protein Length | 135 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 642669067 |
|---|
| Product | PilT protein domain protein |
|---|
| Protein accession | YP_001943495 |
|---|
| Protein GI | 189346966 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1487] Predicted nucleic acid-binding protein, contains PIN domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 0.767558 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACGGTC TGCTTGTTGA TTCAAATATC ATCCTGGATG TTTTTCTCGA TGATCCTGTC
TGGGCTGACT GGTCGGAGGC CGTTCTTTCT GAATATGCCA CTCATTCCCC TTTATGCATC
AATCAAATCA TCTATTCCGA AATTTCCATC GGATTTAAAA AGATCGAGGA ACTGGAGGCG
GCGATTTCGT CAAGCGGACT TACGATGCTG GAGATCCCAA AGGAAGCCCT TTTTCTTGCA
GGAAAAGCTT TTCTCAGCTA CCGAAAGCGT AAAGGTGAAA AGAGGTCTCC ATTGCCGGAC
TTTTTTATTG GTGCCCATGC CGCAGTATCG GGTCTTGAAT TGATCACACG GGATAAAAAC
AGATATCGAA CGTATTTCCC GACAGTCAGA ATCATTTCAC CGGAATAA
|
|---|
| Protein sequence | MNGLLVDSNI ILDVFLDDPV WADWSEAVLS EYATHSPLCI NQIIYSEISI GFKKIEELEA
AISSSGLTML EIPKEALFLA GKAFLSYRKR KGEKRSPLPD FFIGAHAAVS GLELITRDKN
RYRTYFPTVR IISPE
|
|---|
| |