Gene Clim_1400 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagClim_1400 
Symbol 
ID6356171 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium limicola DSM 245 
KingdomBacteria 
Replicon accessionNC_010803 
Strand+ 
Start bp1505550 
End bp1506533 
Gene Length984 bp 
Protein Length327 aa 
Translation table11 
GC content52% 
IMG OID642669011 
ProductrfaE bifunctional protein 
Protein accessionYP_001943439 
Protein GI189346910 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2870] ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase 
TIGRFAM ID[TIGR02198] rfaE bifunctional protein, domain I 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.00129952 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTACTCTC TCCCGATTGA AAAGATCGTC GCATCATTCA GCCGACTTAA AATCGCCGTT 
ATCGGCGACA TCATGCTCGA CAAATATATT TTCGGACATG TTTCGCGCAT CTCACCGGAA 
TATCCCGTTC CGGTCGTCGA TGTCACCCAC GAGGACCACC GCATAGGTGG AGCGGCGAAC 
GTCGCGCGAA ACACCCTCTC TCTCGGCGCT GAGACGTTTC TTATCGGTGT TACCGGCACT 
GACGGAAATC GGGAGATTCT TGCGGAACTC TTCGAAAAAC AGGGTCTTCG AACAGATCAT 
CTCGTCAGCG ATGCCTCTCG CCCCACAACC TGTAAAACAA GAATTCTCTC ACAGAACCAT 
CACATTACCA GAGTGGATTT CGAAAGCCGG CTGCCCATTC AAGGCGCAAT CGAGAAAAGC 
ATTGCAGGAA AACTGCGGGA GGTGGCGGAA TCGATCGATG CGATCATTCT CGAGGATTAC 
AATAAAGGTG TGCTGACGGC CGGCCTTATC CGGGAGCTTA TCGGTATCGC AATGGACCAC 
GATATTCCTG TGCTTGTAGA CCCTAAACTC GAGGGATTTT TCGCCTATCA GGGATGCACG 
GTTTTCAAGC CAAATCTTTC AGAACTGGCT TCCTCTCTCG GCATGGTGGT GCAGAACAAC 
GACCTTGAGG TCGAGATGGC CTGTCTGAAG CTTCAGGAAA AACTTGAAGC AGAAAACCTC 
GTCGTGACCA GAAGTGAAAA AGGCATGACC ATTTTCAATG GAGAGTTCAC GCATATCCCT 
GCCGCATCAC TTGAAGTCGC CGATGTTTCA GGAGCCGGGG ATACGGTAAT CGGAGTACTT 
GCCCTGGGAA CTGCCGCCGG ACTCGACATC GTTACCAGCG CAGAAATCGC GAACTTCGCA 
GCCGGCACGG TCTGTCAGGA GGTTGGCGCC GTTCCGGTAA AGGGAGACCG ACTGATCAGG 
GCGTATCAGG AGCGTCTTCG ATAA
 
Protein sequence
MYSLPIEKIV ASFSRLKIAV IGDIMLDKYI FGHVSRISPE YPVPVVDVTH EDHRIGGAAN 
VARNTLSLGA ETFLIGVTGT DGNREILAEL FEKQGLRTDH LVSDASRPTT CKTRILSQNH 
HITRVDFESR LPIQGAIEKS IAGKLREVAE SIDAIILEDY NKGVLTAGLI RELIGIAMDH 
DIPVLVDPKL EGFFAYQGCT VFKPNLSELA SSLGMVVQNN DLEVEMACLK LQEKLEAENL 
VVTRSEKGMT IFNGEFTHIP AASLEVADVS GAGDTVIGVL ALGTAAGLDI VTSAEIANFA 
AGTVCQEVGA VPVKGDRLIR AYQERLR