Gene Clim_1375 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagClim_1375 
Symbol 
ID6356145 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium limicola DSM 245 
KingdomBacteria 
Replicon accessionNC_010803 
Strand
Start bp1477320 
End bp1478777 
Gene Length1458 bp 
Protein Length485 aa 
Translation table11 
GC content55% 
IMG OID642668985 
ProductCarbamoyl-phosphate synthase L chain ATP-binding 
Protein accessionYP_001943414 
Protein GI189346885 
COG category[I] Lipid transport and metabolism 
COG ID[COG4770] Acetyl/propionyl-CoA carboxylase, alpha subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0154864 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACAAAA AAATCAGAAA GGTTCTTGTA GCCAATCGCA GCGTACCGGC GGTACGGGTT 
ATTCAGACAT GCAAAGACAG AAAAATCCCG ACGACGGCGG TCTACAGTAC TCCGGACCGG
CTTGCAGCCC ATGTGTTCAT GGCGAATGAT GCGGTTCATA TCGGCGAGGC TCCGCCGGTA
GAGTCGTACC TGAACATGGA AAAGATTATC GCCGCAGCCC TCAAAACCGG CGCAAACGGC
GTGCATCCAG GCTGGGGCTT CCTTTCCGAA AATGCAAAGT TCGCCCGAAT GGTGCAGGAT
TCGGGCCTGA TATGGATCGG GCCGAGCCCT GAAGTGATCC ACAAGATGGG CGACAAGATC
GAGTCGAAAA AAATTGCCAA AGAAGCCAGA GTCCCCACCA TTCCGGGCAT CAACTCGCCG
AACACAACCG AGGAAATCCG CAGGTGGATG CAGGAAGAGG ACGTTGTGTT TCCGATTATC
ATCAAAGCCT CTTCGGGCGG CGGCGGCAAG GGGATGGTGA GGGTCGGCAA CGACACGGAA
CTTGAGACCG CGCTGGCACA GGCCCGGTCG GAAGCGAAAA AATCATTCGG CAACGACGAA
ATACTCGTTG AGAAGTTTAT CGAAAAGGGC AAGCACATCG AGGTGCAGAT CATTGCCGAC
CAGCACGGCA ACGTGCTTCA TCTCTACGAT CGCGAGTGCA CGCTGCAGCG CCGCAATCAG
AAGGTGATCG AAGAGGCCCC CTCTCCCAGC CTCGACGAAG AGACCCGCAA CTCGATCTGC
GAAACGGCCG TCCGGCTCAT GCGCACAATC GGCTACTCCT CTGCAGGCAC GGTCGAGTTT
CTGCTCGATG CAGCAACCGG CAAGTTCTAC TTCCTCGAAG TGAACACCCG CCTTCAGGTT
GAGCATGGCA TTACCGAGCT GGTAACCGGC GTGGATATCG TCAGCCTGAT GCTCGACATA
GCCCAGGGCG AACCGCTCAG CTTCCGGCAG GAAAACATCC GTCCGAACCG CTGGGCGCTG
GAAGTCCGTC TCAACGCGGA AGATCCTGCA ACGTTCAACC CTTCATTCGG CAACATCAGC
CGCCTGCACC TGAATCTCTA TCCAGGAACC AGAGTTTCGC AGGGGGTCTA TGAGGGCTCT
GAAATTCCTC CCTACTACGA CTCGCTGATC ATGCTCCTGA TGACAACCGG CCCCGACAGG
GAAACCGCTA TCATGAAGAT GGACAGCATT CTCTGCCGGA ACCTGAGGGT CGAAGGGGTC
AAAACACTTT CGCCGCTGCT TTTGAGCATC ATCCGGCACC CGAATTTCAT CAAAGGCGAT
TTTTCAACGC GTTTTATCGA AGAGCATATG GACGAGCTCG TCTCCATGTT CCCCGAAAGC
GACAGCGAAG AGGATGCGCT GAAAATCGCC AGATATGTAG CTGAAATTTC TGCACTTGGA
ACACCGAACT GGATTTAA
 
Protein sequence
MDKKIRKVLV ANRSVPAVRV IQTCKDRKIP TTAVYSTPDR LAAHVFMAND AVHIGEAPPV 
ESYLNMEKII AAALKTGANG VHPGWGFLSE NAKFARMVQD SGLIWIGPSP EVIHKMGDKI
ESKKIAKEAR VPTIPGINSP NTTEEIRRWM QEEDVVFPII IKASSGGGGK GMVRVGNDTE
LETALAQARS EAKKSFGNDE ILVEKFIEKG KHIEVQIIAD QHGNVLHLYD RECTLQRRNQ
KVIEEAPSPS LDEETRNSIC ETAVRLMRTI GYSSAGTVEF LLDAATGKFY FLEVNTRLQV
EHGITELVTG VDIVSLMLDI AQGEPLSFRQ ENIRPNRWAL EVRLNAEDPA TFNPSFGNIS
RLHLNLYPGT RVSQGVYEGS EIPPYYDSLI MLLMTTGPDR ETAIMKMDSI LCRNLRVEGV
KTLSPLLLSI IRHPNFIKGD FSTRFIEEHM DELVSMFPES DSEEDALKIA RYVAEISALG
TPNWI