| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Clim_1359 |
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| Symbol | |
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| ID | 6354552 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium limicola DSM 245 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010803 |
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| Strand | - |
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| Start bp | 1454628 |
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| End bp | 1458308 |
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| Gene Length | 3681 bp |
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| Protein Length | 1226 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642668968 |
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| Product | exodeoxyribonuclease V, beta subunit |
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| Protein accession | YP_001943398 |
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| Protein GI | 189346869 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1074] ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) |
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| TIGRFAM ID | [TIGR00609] exodeoxyribonuclease V, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.182882 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGATAC GCATTCTCGA TCACTCCACG GTGCCGCTTT CGGGCATGAA CCTCATTGAG
GCGAGCGCCG GCACGGGCAA AACCTGGGCG ATCACCTCGC TCTACCTTCG GCTGCTGCTT
GAAAAGGAGC TGCGGCCCGA ACAGATTCTT GTGGTTACCT ATACCGAAGC CGCCACCAGG
GAGCTGCATG CGCGCATTCG CCGCCGCATC CGACAGGCGC TCGATGCCAT GCGCGGAGAT
CCGACGGACG ACCCATTCCT TATCGACCTC TGCGATCGCG CCGCACAGGC AGGGGAGGAG
GAGCGGGCCG CCCTGCTGCT TGAAGCCGCA CTTGCCGAGT TCGACACGGC CGCAATCTTC
ACCATTCACG GTTTCTGCAA TCGCGCCCTG CAGGATCACG CCTTCGAGAG CGGAGCGCTC
TACGACACCG AGATTGTCAC CGACCAGTCG GCGCTTGCGC GGGAGGTGAT CGACGATTTC
TGGCGTGAAC GCTTTTTCGG CAGTGCCGAC CGCCTGCTCG GCTATGCGCT GCTCAAGGGG
TGGTCTCCGG ACGCCTTCAT GGCCTTCCTG AAATCCCTGC AGCTTTCGGG GCGTGACGAG
GTGATCCCGG TCTATGGCGA GGCGGAAATC GCCCGGATCG GGCATGAAGC AGAGGCGGCT
TTCGACGAGG TGCGCCGCAT CTGGAGCGAA GAAAAGGAGC CGGTTTCGGC GCTCCTCCGC
ACAGGCAAGG GGCTCAGCCG TTCCGAAAAA GCCTACCGGG CGGACAGGGT GGAGCAGCTG
CTCTCCGACA TGGAGGTTTT CGTGGCCGCC GGAAACCCCT TCGGCCTTTT CGACGGCTTC
GACAAGCTCA CCGCTTCAGG CATCGCAAGC GGTACCAAAT CCTCCGGCAC CGCTCCCTCG
CATCCGCTCT TCGACACCTG CGAACGTCTG CAGGCGGCCG CTGACGAGCG GTTGCAAGCC
CTGAAATCGG AGGTGGTGGC GTTTTACCGC AAGCGGTTGC CGGAGCGCAA GAAAGAGCGC
AACATCCGTT TTTTCGACGA TCTGCTCGCC GACCTTTATC AGGCACTCCA AGGCGGATGT
GAGATCGCGG CCACCCCAGG TGGCCTTGAA GCCTCCGCGA TTATAGAAAT CGGCCTTGAG
GCCGCCGCAC TTGCCGAAGC GCTTCGGAAC CGGTACCGCG CAGCCCTGAT CGACGAGTTC
CAGGACACCG ATCCGGTGCA GTACGACATT TTCCGGCGCA TCTATGCCGG TTCGGAGGCG
CCGCTCTTCC TGATCGGCGA TCCCAAGCAG GCGATCTACA GTTTCCGCGG AGCCGACATT
TTCGCCTATC TGCAGGCCGC CAGTGACGTC GGCCGGGAGC GCAGCTTCAC GCTCAACACC
AACTGGCGTT CGGTGCCGAA ATTGCTTGAC GGTTTCAACC TGCTTTTCGA CAGCGCGCGT
CACCCCTTCG TGTTCGACAA TATACCCTCG CCGCCTCTCG TGGCGGGAAA GGAACTGCCC
CGGGATGCCG AATCTCCGGT GCCGCCGCTT GAAATCTGCC TTCTCCGATC CGGCGACGGC
GACGGCAGTC TGAAGAGCGG AGAGTCCGAA CGGTTCGCTG CCGGAGCCTG CGCATCCATG
GTTACGGAAA CCATCAACGG AGGCTCCGAT GCGGGCGACA TTGCCGTGAT CGTGCGCACC
CACAGGCAGG CCCGGATGAT GCAGACCGCA CTCCGTGAGT GTGGCATCGT CTCCGTCATG
CGCAGCGACG AAAGCGTCTT CGCCTCCGTC GAGGCCGAGG AGGTGCGCAT TCTCGTGACG
GCGCTCGCCG AACCGGGCCG CGAGTCGCTC GTGCGTGCCG CCCTCGTTAC GCCGCTTTTC
GGGCTGAACG GCAGCGATAT CGCTCGCCTC AACGACGACG AAAACGCCTG GGTGGAGCGG
TTGCAGCAGT TCCGCGAGTA CCACCGTCTC TGGCAGGAGT GCGGCTTCAT GGTCATGGTT
CGCGAACTGA TGCGCCGCGA AGCCGTGCGC GAGCGCCTGC TGGCCCTTTC CGGATCGTCC
GGCGAGCGCG CCCTGACCAA CGTGCTTCAC TGCTTCGAGC TGCTGCACCG TGAGGCGCAC
AGCCGGGGGC TCGGCATGGA GGGGCTGGTC ACCTGGTTCG GCGAACGGGT TGCGGCAAAG
GAGCCCGGCG AGGAGTACCA GATCCGGCTC GAAAGCGACG AACCTGCCGT CCGGATCGTC
ACCGCCCATG TGAGCAAGGG GCTGCAGTAC CCGATTGTGT TCTGCCCCTT CCAGTTCGGC
GGCGGGAACG GAAGCGGGGA TGTTGTGCTG TTCCATGACG ACGACGGACG GATGAAGAGG
GATTTCGGGT CGCGGGCGAT AGAGCGCCAC CGGGCGCTGG CCTCGCGCGA ATTCCTCGCC
GAGAACCTGC GCCTCTTCTA TGTCGCCCTG ACGAGGGCCG AACGGCGCTG CATTTTCTTC
ACCGCCCGGA TCGTCGATGC ACGCCAGTCC GGCCGTACCC CGATGCTTTC GCCCTCTTCC
TATCTGCTCT ACGTTTCGGA CGAGGCCAGT CAGAGTCCCA GGCTGATCGG AGAGGCGCAG
CAAGAGCTTG CCGCGCTCGA TGCCGGGACG ATGGCGGAAA GGCTTCAGAA TATCTCGGAC
GAATCTGGCG GAGCGATCCG GCTCAGGCGT CTCTCCCTCG ACGACGATCT CACGGTGCCT
CTCATTCGAA CCGCAGCGGC CGATTCTCCT TCGTTTGCGC TTCGGGAGTT CACAGCGAGT
CTCGAAACCG ACTGGCGGAT CGCGAGTTTC ACCACCCTCA GCCGCCACCA TCACATGGCC
TTCGAGCTGC CCGACCGCGA CGAAAGCACT CCGGAGCAGC AGGCAGCCGC CGCTCCGGCT
GTGCTGCCCG ACACGGATCG CTCCATCTTC GCCTTCCCGA AAGGGGCAGG AGCGGGCATC
CTCATGCACT CGATCTTCGA AACGCTCGAT TTCGCCAATG CTATTGACGA TACCTCTGAG
AGCCACATAG AAGAGGCTTC CATCAGGGCG CTCGACCGCT ACGGATACGA ACGCCACTGG
CAGCCCTGCC TGACCGGGAT GGTGCAGCAG GTGCTCCGGA CGGAGCTCTC CTCGCAGGAG
GGGAACTTCA CTCTCGGCGG GCTCCGGCAG GGGAGCTGGA GCACCGAGCT GGAGTTTTTC
TTCCCGCTCC GGCACGTCAC CTCGCCCCGG CTTTCGGAAC TGCTCATGAG GCACGGCGTC
ATTCCAAACG GTGCCGATCC CGCTGCCGCC CTGCAGGCGC TCGATTTTAC GCCGGTCAAG
GGGATGCTGA TGGGATTCAT GGACATGGTG TTCGAAGCGA AGGGGCGCTA CTATCTGCTC
GACTGGAAAT CGAACCACCT CGGCAACGCC GTCGAAGCGT ACCATCGGGA GAGGCTCGGC
AAGGCGATGC AGGAGAACCT CTACCGGCTG CAGTACCTGC TCTACACGGT GGCGCTCGAC
CGTTTTCTCT CGCTGCGCGT GCCCGGCTAC CGCTACGACA CCCACTTCGG CGGTGCGATC
TACGTTTTCC TGCGCGGAGT CAGCGTCGAA CGGGGCGAGG AGTACGGCTT CTACCGCGAT
CTGCCGTCAG AAGCGCTGAT CCGCGAATTG CAGGAACTGC TGATCGAAAC GGAAACAGGA
ACAGGGGAGA GCGAAGCATG A
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| Protein sequence | MTIRILDHST VPLSGMNLIE ASAGTGKTWA ITSLYLRLLL EKELRPEQIL VVTYTEAATR
ELHARIRRRI RQALDAMRGD PTDDPFLIDL CDRAAQAGEE ERAALLLEAA LAEFDTAAIF
TIHGFCNRAL QDHAFESGAL YDTEIVTDQS ALAREVIDDF WRERFFGSAD RLLGYALLKG
WSPDAFMAFL KSLQLSGRDE VIPVYGEAEI ARIGHEAEAA FDEVRRIWSE EKEPVSALLR
TGKGLSRSEK AYRADRVEQL LSDMEVFVAA GNPFGLFDGF DKLTASGIAS GTKSSGTAPS
HPLFDTCERL QAAADERLQA LKSEVVAFYR KRLPERKKER NIRFFDDLLA DLYQALQGGC
EIAATPGGLE ASAIIEIGLE AAALAEALRN RYRAALIDEF QDTDPVQYDI FRRIYAGSEA
PLFLIGDPKQ AIYSFRGADI FAYLQAASDV GRERSFTLNT NWRSVPKLLD GFNLLFDSAR
HPFVFDNIPS PPLVAGKELP RDAESPVPPL EICLLRSGDG DGSLKSGESE RFAAGACASM
VTETINGGSD AGDIAVIVRT HRQARMMQTA LRECGIVSVM RSDESVFASV EAEEVRILVT
ALAEPGRESL VRAALVTPLF GLNGSDIARL NDDENAWVER LQQFREYHRL WQECGFMVMV
RELMRREAVR ERLLALSGSS GERALTNVLH CFELLHREAH SRGLGMEGLV TWFGERVAAK
EPGEEYQIRL ESDEPAVRIV TAHVSKGLQY PIVFCPFQFG GGNGSGDVVL FHDDDGRMKR
DFGSRAIERH RALASREFLA ENLRLFYVAL TRAERRCIFF TARIVDARQS GRTPMLSPSS
YLLYVSDEAS QSPRLIGEAQ QELAALDAGT MAERLQNISD ESGGAIRLRR LSLDDDLTVP
LIRTAAADSP SFALREFTAS LETDWRIASF TTLSRHHHMA FELPDRDEST PEQQAAAAPA
VLPDTDRSIF AFPKGAGAGI LMHSIFETLD FANAIDDTSE SHIEEASIRA LDRYGYERHW
QPCLTGMVQQ VLRTELSSQE GNFTLGGLRQ GSWSTELEFF FPLRHVTSPR LSELLMRHGV
IPNGADPAAA LQALDFTPVK GMLMGFMDMV FEAKGRYYLL DWKSNHLGNA VEAYHRERLG
KAMQENLYRL QYLLYTVALD RFLSLRVPGY RYDTHFGGAI YVFLRGVSVE RGEEYGFYRD
LPSEALIREL QELLIETETG TGESEA
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