| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Clim_1358 |
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| Symbol | |
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| ID | 6354551 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium limicola DSM 245 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010803 |
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| Strand | - |
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| Start bp | 1452865 |
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| End bp | 1454631 |
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| Gene Length | 1767 bp |
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| Protein Length | 588 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642668967 |
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| Product | exodeoxyribonuclease V, alpha subunit |
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| Protein accession | YP_001943397 |
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| Protein GI | 189346868 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0507] ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member |
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| TIGRFAM ID | [TIGR01447] exodeoxyribonuclease V, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACATTG AGTTTTGCCA GCGATCCATC GACCGCCAGA TAGCGGAATA TCTCTGCCGT
AGTATAAACG ACGAAACGGG GGTGATGCGC ACCGTGGTTT CGCTGCTCAG CCAGGCGGTG
GGGCAGGGGA ATGTCTGCCT CGACCTCGAA GAGGTGGCCG GAGAGGTTGT GCGGATTCCG
GGCCGGGAGG AGCCGCTGCG TCTGCCCGAC ATAGAGCGCC TTGTTTCTGC ACTCCGTTCG
CTTCACACGG TCGGCAGGCC GGGTGAGCAC CGCCCGCTGA TCCTCGACGA AGCAGGACGG
CTCTATCTCT ACCGTTACTT CCGCTATCAG GAGACGCTCG CCGAGGCCAT TCTCGCCCGT
GCTGCAACGG AGACCGGCAG CCCCGACGAA GCCGCGCTTT CCGAAAGTCT CGACCGCTAC
TTCGGCCCCG ACGAATCGGG GGAGGATCGT CAGCGGCAGG CGGCACTCAC GGCGCTCAGG
AGAGGCTTTT CGGTTATCTC CGGCGGCCCA GGCACGGGAA AGACCACCAC GGTGGTGCGC
ATTCTCGGTC TTATGCTGGA ACAGCCCGGC GGAGAGCGGA TGCGCATCGC CATGGCAGCA
CCAACGGGAA AGGCAGCCGC ACGCCTCGCC TCGTCGATAG CATCGCTCCG GGAGACCTTG
CCCTGCTCCG AAGAGGTGAA ACGCCATCTG CCCGGCCAGG TCACCACCAT TCACCGGCTG
CTCGGCACCA TTCCCAATTC GACCGGATTT CGCCATAACG CCCGTAATCC GCTTCCGTAC
GATACTATCA TCGTCGATGA AGCCTCGATG GTCGATCTGC CGCTCATGAC CGCCCTCGTC
ACGGCGCTTA TGCCGCATGC CCGTCTTATC CTCATCGGCG ACCGCGACCA GCTCGCCTCG
GTCGAAGCCG GAGCCGTACT CGGCGATATC TGCCGCGCTG CCGAATCTTC CGGCTCCGCA
GCTTTTTCCA TCAAAGGGTG CGTCACCGTG CTCGACCGCA ACTACCGTTT CGGCGACGGT
TCCGGCATCG CATCCCTCAG TCGCGCCATC AACAGCGGAG ACGCAGGTGA AGCCCTCCGG
CTGCTTGGCG ACCCGGCCAA CACCACCATC GCCCTCGAAG CCACGCCGAC GCGTGAAGCC
GTCAGGAAGC GCCTTGCAGC TCGGGTACTC GAAGGCTTCC GCCCATACCT CGAAGCCGAA
ACTCCGGAAG AAGCCCTGCG CCTTTTTGAC CACTTCCGCA TCCTCACCGC CCTCCGCGAA
GGCCCCTGGG GAGCCGCCGG CATGAACCAC ACGGTCGAAA CCCTGCTCCA TGAAGCGGGA
CTCCTCACGG CCAGCACCCC GTTCTACCGC GGCAGACCCG TGCTCGTCAC CGAAAACGAC
TACACCCACA AACTCTTCAA CGGCGACACC GGCATCATTC TCCCTGACCC CGAAACCGGC
AAGCAGAAAG CATATTTCAT CGCCTCCGAC GGCACCGTCC GCTCCATCCC CCCTGAGTTC
CTCCCGGCGC ACGTAACCGC CTTCGCCATG ACGGTACATA AAAGCCAAGG CTCCGAATTC
GACCGGGTAC TCATGGTGCT CCCGCCTGAG GACACTATTC TCCTGACAAG AGAACTGATC
TATACAGGCA TTACAAGAGC ACGGCAGGCC GTTACGGTGT GGAGCGATGA AACTGTCTTC
AGTGCTTCGG TAAAGCGCAG GACGGAGCGG AGGAGTGGGT TGAGGGAGAT GCTTGTAGAT
AAACAAAAAT CAGATCAGGA TAGCTGA
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| Protein sequence | MNIEFCQRSI DRQIAEYLCR SINDETGVMR TVVSLLSQAV GQGNVCLDLE EVAGEVVRIP
GREEPLRLPD IERLVSALRS LHTVGRPGEH RPLILDEAGR LYLYRYFRYQ ETLAEAILAR
AATETGSPDE AALSESLDRY FGPDESGEDR QRQAALTALR RGFSVISGGP GTGKTTTVVR
ILGLMLEQPG GERMRIAMAA PTGKAAARLA SSIASLRETL PCSEEVKRHL PGQVTTIHRL
LGTIPNSTGF RHNARNPLPY DTIIVDEASM VDLPLMTALV TALMPHARLI LIGDRDQLAS
VEAGAVLGDI CRAAESSGSA AFSIKGCVTV LDRNYRFGDG SGIASLSRAI NSGDAGEALR
LLGDPANTTI ALEATPTREA VRKRLAARVL EGFRPYLEAE TPEEALRLFD HFRILTALRE
GPWGAAGMNH TVETLLHEAG LLTASTPFYR GRPVLVTEND YTHKLFNGDT GIILPDPETG
KQKAYFIASD GTVRSIPPEF LPAHVTAFAM TVHKSQGSEF DRVLMVLPPE DTILLTRELI
YTGITRARQA VTVWSDETVF SASVKRRTER RSGLREMLVD KQKSDQDS
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