| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Clim_1266 |
|---|
| Symbol | |
|---|
| ID | 6355367 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium limicola DSM 245 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010803 |
|---|
| Strand | - |
|---|
| Start bp | 1366685 |
|---|
| End bp | 1368634 |
|---|
| Gene Length | 1950 bp |
|---|
| Protein Length | 649 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 642668882 |
|---|
| Product | putative CBS domain and cyclic nucleotide-regulated nucleotidyltransferase |
|---|
| Protein accession | YP_001943312 |
|---|
| Protein GI | 189346783 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2905] Predicted signal-transduction protein containing cAMP-binding and CBS domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 39 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCGTCAA ACACCATTGT TGAGCGTGTT GCTGCAGATC TCAGCAAATA CCCACCGTTC
GATGTGCTTG AGCCTTCAGT TATCCAGGAC CTTGCTTCCT GCATATCCAT TCACTATCAC
GAGGAAGGTG AAGTGATTTT CAATAAGGGC GATGTACTGG GAGATGCTTC GTTCATGGTT
ATGAAAGGGG CCATCAGGCT TTTTGACACC ATTGACGGCG AAGAGGTGCT GGTGGATCTC
TGTGATGAGG GTGATATTTT CGGAGTTCGG GCAATTTTCG GCGGTAGCAC CTATGTTCTG
AGCGCTCACG TTGCCGAGGA GAGCCTTATT TATGAAATGC CGGTCGAGAA AATACGAAGC
CTCATTGCGG CCAATACCTC GCTTTCCATG TTTTTTGCTG GGGAGTTCGC AAAAAGCATG
CAGGTGATGG AGAGAACCCT TACCAATGCA TTTGACCAGC ATCGGGTACG GTATAATGAA
CAATCCTGCA GAAGCTTTCT TGAGCACGAG ACGCTTGAGG TGAAGCCGGT GACCAATGTC
ATTACCTGCT CTCCGGATAT CAGCGTCAGG GCTGCCGCGA AAATCATGTC GGACTGCAAT
ATCGGTTCGA TACTTGTAGT ATCTCCGGAA AATCATCCGC TTGGCATTAT TACCGATACC
GATCTGCGCA AAAAAGTAGT AGCGCAGCCT GGCTCCGTCA ATGAGCGTCC GGTGCACGAA
ATCATGAGCA GTCCGGTCTA TACCATTACT GGAGGCAAAA CCGTGGCAGA TATGGTGATG
CTGATGGTGA AAACCAAGCT TCGCCATTTC TGTATTACTG AAGACGGTAC GGTGGACAGC
CCTCTGCAGG GTATTATTTC AGAGCATGAT ATCATTACCT CCGAAGGGAA CAACCCGGCT
GTGATCATGA AAGAGATCAT GGCTGCCGAA CAGGTGGAGC ATCTGAGAAA AGAGCGGGAC
AAAGCTGAAA ACCTGCTTCA GGTTTATATC CGCCAGGATG TGGCAGTTCA TTTTATTTCG
AATATCATCA CTGAAATCAA TGACGCCCTC ATCGTCAAGG CGATAACCTT TGCCGTTGCT
GAACTTGAGC ATGAAGGTCT CCGCAGGCCG TCCGCTCCAT TCTGCTGGCT CTCTCTGGGC
AGCGAAGGAC GAAAGGAGCA ACTGCTGCGT ACCGATCAGG ATAATGCTCT TCTTTATGCG
GATCCGCCGG AGGGAAGGGA AAAGGAGGTT CACGATTACT ATCTTGCTCT CGGCCGGAAA
GTGACCGCCA TGCTTGTAGA AACAGGGTTC GAAAAGTGCC CTGCAGAGGT TATGGCCAGT
AATCCGCAAT GGTGCCAGCC GGTATCGGTC TGGAAAAAAT ATTTCAGCCG CTGGATTCAG
AGTCCGGAAC CGAAAGCTCT GATGCATTCA ACGATCTTTT TCGATTTTCG TCCGGTTTAC
GGAGAGGCCG TTCTGGCCAT GGAACTCAAG CGGAACATTT TCGAGGAGAT TGCGACAGGC
AGGGGATTTC TTGAGTTTTT CGCAAAAAAT GCGCTTCAGA ATCCACCGCC TCTCGGATTT
TTCAGAAACT TCATGGTAGA AAAAAGCCGT GACCACGCCA ATGAGTTCGA TATCAAATCA
AGAGCCATGA TGCCGCTTTC AGATGCGGCA AGAGTGCTCG CTTATGAGTT GAGGGTTCCT
GACTATCTGA GCACTTCCGA ACGATTTCGC AAACTTGCGG AACTGATGAC ACCGGAACGC
GATCTCTGTC TTGAAGCCGC GGGTGCATAT GAGTTTCTGA TGCGGCTGCG GGTGGTGAAC
GGATTGCGTC TTGATTCTTC AGGCCGCTAT ATCAATCCTG AAAATCTGAA CAAAATAGAC
CGGCAGATGC TTCGTAATGT TTTTGCAACG ATAGAGCAGA TACAGAAAAC CCTTAACCTG
AGATTCCAGC TTGACTATAT CCGTGATTGA
|
|---|
| Protein sequence | MPSNTIVERV AADLSKYPPF DVLEPSVIQD LASCISIHYH EEGEVIFNKG DVLGDASFMV
MKGAIRLFDT IDGEEVLVDL CDEGDIFGVR AIFGGSTYVL SAHVAEESLI YEMPVEKIRS
LIAANTSLSM FFAGEFAKSM QVMERTLTNA FDQHRVRYNE QSCRSFLEHE TLEVKPVTNV
ITCSPDISVR AAAKIMSDCN IGSILVVSPE NHPLGIITDT DLRKKVVAQP GSVNERPVHE
IMSSPVYTIT GGKTVADMVM LMVKTKLRHF CITEDGTVDS PLQGIISEHD IITSEGNNPA
VIMKEIMAAE QVEHLRKERD KAENLLQVYI RQDVAVHFIS NIITEINDAL IVKAITFAVA
ELEHEGLRRP SAPFCWLSLG SEGRKEQLLR TDQDNALLYA DPPEGREKEV HDYYLALGRK
VTAMLVETGF EKCPAEVMAS NPQWCQPVSV WKKYFSRWIQ SPEPKALMHS TIFFDFRPVY
GEAVLAMELK RNIFEEIATG RGFLEFFAKN ALQNPPPLGF FRNFMVEKSR DHANEFDIKS
RAMMPLSDAA RVLAYELRVP DYLSTSERFR KLAELMTPER DLCLEAAGAY EFLMRLRVVN
GLRLDSSGRY INPENLNKID RQMLRNVFAT IEQIQKTLNL RFQLDYIRD
|
|---|
| |