Gene Clim_1241 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagClim_1241 
Symbol 
ID6355342 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium limicola DSM 245 
KingdomBacteria 
Replicon accessionNC_010803 
Strand
Start bp1339328 
End bp1340578 
Gene Length1251 bp 
Protein Length416 aa 
Translation table11 
GC content51% 
IMG OID642668857 
Productprotein of unknown function DUF214 
Protein accessionYP_001943287 
Protein GI189346758 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG4591] ABC-type transport system, involved in lipoprotein release, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAACAG CATTTTGGAT TGCCCGGAGG TTCAGCTTTG CCCGTAAACG GTTCAGGATC 
ATCAATGTGA TCTCGGCCAT CAGCCTTGCC GGCATCATCG TCGGGGTGAG CACCCTGCTC
ATTGTGATGA GTGTCCTTAA CGGCTTTCAG AAACTTGCCC TCGATATGTT TACGACTTTC
GAAGGTCCGG TACAGCTGGT TTCACGTAAC GGCGATCCGA TTGAAGTAAG CGACAGCCTG
CTTGCATCTA TAGCTTCGGT CAGGGGAGTT GCCTCTGCAG AGCCTTTTGC AGAAGGGGAG
GCCATTATGT CCGGAGGAGA AAAAAGCGAA CTGGTCATGA TAAGAGGTTT AAGCGCAACG
GCCCACCGTG AACTGATGCG TAAAACAGGT ACCGTGCAGC CCTATTTCAG CGGAGAAACG
GTTTCTTCAG GAATATTGCT TGCCGAACGC ATGAAACTCT CCCCCTTCCA CGAAATCAAA
CTGTTCAGTC CCGAACTTAT TACCCTCGGA CTTGAAATGC TTTCTGAGCC GTATATGCTT
GCCGCTCTCA AAATACCGGA AACAAAGGTC GCATCAAGGT TTACCCTGCA GAAAATCTTT
GACGACCGCT ATGTTCTCGC ACCAAACAAC TTTGCACGAA ACGTGCTGCT TCTGGGTGGC
AGCAGCTACA GCGGCATCGA TATACGTGCG GAAGCAGGGG TGTCCGGTCC TGAGCTGAAG
AAACGTCTCG ACCGTTGGCT TCTCGCATCG CCTCTCAGGA AAAGCTCCAC TCTGAGGACA
CTGGAAAGCA AGTACGGCGA TATTTTTGCC GTCATGGAAC TTGAAAAATG GGCAAGTTTC
AGCGTATTGA TGCTTGTCGT ACTTGTAGCT GCGCTCAGCC TGACCGGGTC GCTGGCCATG
ACCGCAATAG ATAAACAGAA AGAACTATTC TATCTGCGCT GTCTTGGTCT CGAAAAACCG
CAGTTCATGG AGATATTTCT TATTCAGGGA GGAATGACCG GGATAGGCGG CACTGCCGCC
GGAACAGCGT TAGCCTGGAT TGTCTGTCGG CTTCAGGAGG CTTACGGACT TGTCGAACTG
CCGTCCAAAA GCGCATTCAT CATAGAGGCA TATCCGGTCA GCATGAAAAC AACTGACTTT
CTCGCCGTAG GAGCTACCGC GATTGCCCTG AGCTTTCTGG TCAGCCTTTA CCCGGCACGG
AAAGCTGCGT CGATTGCCGG AAACCACTCG CTTGAAACGA AAACAAACTG A
 
Protein sequence
MKTAFWIARR FSFARKRFRI INVISAISLA GIIVGVSTLL IVMSVLNGFQ KLALDMFTTF 
EGPVQLVSRN GDPIEVSDSL LASIASVRGV ASAEPFAEGE AIMSGGEKSE LVMIRGLSAT
AHRELMRKTG TVQPYFSGET VSSGILLAER MKLSPFHEIK LFSPELITLG LEMLSEPYML
AALKIPETKV ASRFTLQKIF DDRYVLAPNN FARNVLLLGG SSYSGIDIRA EAGVSGPELK
KRLDRWLLAS PLRKSSTLRT LESKYGDIFA VMELEKWASF SVLMLVVLVA ALSLTGSLAM
TAIDKQKELF YLRCLGLEKP QFMEIFLIQG GMTGIGGTAA GTALAWIVCR LQEAYGLVEL
PSKSAFIIEA YPVSMKTTDF LAVGATAIAL SFLVSLYPAR KAASIAGNHS LETKTN