| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Clim_1230 |
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| Symbol | |
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| ID | 6355331 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium limicola DSM 245 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010803 |
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| Strand | + |
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| Start bp | 1327363 |
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| End bp | 1328121 |
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| Gene Length | 759 bp |
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| Protein Length | 252 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 642668846 |
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| Product | peptidase M50 |
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| Protein accession | YP_001943276 |
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| Protein GI | 189346747 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0750] Predicted membrane-associated Zn-dependent proteases 1 |
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| TIGRFAM ID | [TIGR00054] RIP metalloprotease RseP |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 0.704176 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGCATGA TTGTTTCTGT ACTTGCTTTT ATAATCGTCA TGTCGCTTGT GGTGCTTGTC
CACGAGTTCG GTCATTTTCT CGCGGCCCGC AAGGCCGGCG TCCCGGTATA TGAGTTTTTC
GTCGGCTTTC CGTTCAGTCC GCGAATCGCG ACCCTGTATC GCCACAAGGA GACCGAGTTT
ACGTTACGCC TGTTGCCGCT TGGAGGTTTC GTGAGTTTTT CGGCCGACGG AGACGAAGAT
GCGCACAAGC TGTTCGGGGC TTCACCTCTT TCACGCGCTT CGATTATGGT CGGAGGCCCT
TTGTTCAACG TGGTTTTCGC CTATCTGGTG TTTATTCCGG CCTTTTTGGG GAAAGAAGGC
GGTTCGTTGC TGCAGGCGAT ACAGTCGAGC GCACATGCTC TCTGGATGGT GGTGGTCGGG
ACGTTCTCCA TGCTCGGTCA TCTTTTCGCC GGTCAGGGAG GCATGGAAAG TTTTTCCGGC
CCTATCGGGA TTGCCGTAAT GGCCGGACAG GCGGCGAATA CGGGGCTTCC GGATCTGCTT
TTTTTCACAG GAGTACTCAG TATCAGCCTC GGAATCATGA ACCTGATGCC GTTTCCCGGA
CTCGATGGCG GTCAGCTCAT GCTGGTGCTG ATCGAAGCCA TACGTAACCG TCCTCTCGGA
GCGAGATCGT ATCAGGTTAT CAACTTTACC GGCATCATGC TTTTTATCGG GTTGTCGATC
GTCATTACCT GGCACGACAT CCTGCGTCTC GTGAGCTAA
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| Protein sequence | MSMIVSVLAF IIVMSLVVLV HEFGHFLAAR KAGVPVYEFF VGFPFSPRIA TLYRHKETEF
TLRLLPLGGF VSFSADGDED AHKLFGASPL SRASIMVGGP LFNVVFAYLV FIPAFLGKEG
GSLLQAIQSS AHALWMVVVG TFSMLGHLFA GQGGMESFSG PIGIAVMAGQ AANTGLPDLL
FFTGVLSISL GIMNLMPFPG LDGGQLMLVL IEAIRNRPLG ARSYQVINFT GIMLFIGLSI
VITWHDILRL VS
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