Gene Clim_1218 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagClim_1218 
Symbol 
ID6355319 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium limicola DSM 245 
KingdomBacteria 
Replicon accessionNC_010803 
Strand+ 
Start bp1316287 
End bp1317216 
Gene Length930 bp 
Protein Length309 aa 
Translation table11 
GC content58% 
IMG OID642668834 
ProductNa+/Ca+ antiporter, CaCA family 
Protein accessionYP_001943264 
Protein GI189346735 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0530] Ca2+/Na+ antiporter 
TIGRFAM ID[TIGR00367] K+-dependent Na+/Ca+ exchanger related-protein 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCTGACT ATTTCTTTCT GATTGCCGGT ATCGGGTGTG CCGCGTTCGG CGGAGAACTC 
TTTCTTCGCG GGGCAGTCGG CACGGCATCG GCTCTCCGGA TCGCTCCGGC GATCATCGGG 
GTTACGGTAG CTGCGTTCGC CACCTCGAGC CCGGAATTTT CCGTCGCGGT CAGTTCGGGA 
CTTGCGGGCA GATCGCAGAT ATCCCTCGGC GATGCTCTTG GGAGCAATAT CGTCAACATC 
GCACTCATTC TGGGTATCGC TCTGCTCATA TCGGACATTC CCGTCTCATC GGGTACGATA 
AGGCGTGACG TATCGGCTGC CGTGCTCATT CCTCTGTTAA CCGGGTTTTT TCTGCTCGAC 
GGCACGCTTT CGAGGCTTGA CGGATTGCTC ATGCTCTGCA TGTTTATCGC ATGGCTCTCG 
GCGGCGGTAC TCGAAGCTGC CCGCCAGAGG AATTCGAACG AAAGCGGTGC CGGCGGCACA 
GGCGCCATGA ACCCCGCGCT TTTCGCAATC GGCGGCCTCG TCCTGCTCGT CCTGTCCGGC 
CGGCTGATCG TTACCGGAGC TACCGGTATC GCACGTGCGT TCGGGCTGGA CGAGTTCATC 
ATCGGCGCAA CCGTTGTCGC TCTTGGTACC TCCATGCCGG AACTGGCCTC TCTTGTGATT 
GCCAGACTTC GGGGGCACGA TGAAATCGGT CTCGGTACGA TTCTCGGCAG CAATATCTTC 
AACGGATTGT TCATTGTTTC CGTAGCAGCG ATTCTAAGCC CTGTGCGCCC CCCTCTGCCT 
GAAGTGCTTC CCGCGCTTGC TTTCGGACTT CTCTCGGTAC TCATCGCACT TCCCTGGCGG 
AGCAGCGGCC GAATCAGAAG AGTACAGGGA GTGTTTCTGC TGCTTCTCTA TGCCCTCTAT 
ATGGTAACGG TGTATCTGCT GCGTCCGTAA
 
Protein sequence
MPDYFFLIAG IGCAAFGGEL FLRGAVGTAS ALRIAPAIIG VTVAAFATSS PEFSVAVSSG 
LAGRSQISLG DALGSNIVNI ALILGIALLI SDIPVSSGTI RRDVSAAVLI PLLTGFFLLD 
GTLSRLDGLL MLCMFIAWLS AAVLEAARQR NSNESGAGGT GAMNPALFAI GGLVLLVLSG 
RLIVTGATGI ARAFGLDEFI IGATVVALGT SMPELASLVI ARLRGHDEIG LGTILGSNIF 
NGLFIVSVAA ILSPVRPPLP EVLPALAFGL LSVLIALPWR SSGRIRRVQG VFLLLLYALY 
MVTVYLLRP