Gene Clim_1005 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagClim_1005 
Symbol 
ID6355454 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium limicola DSM 245 
KingdomBacteria 
Replicon accessionNC_010803 
Strand+ 
Start bp1096735 
End bp1097832 
Gene Length1098 bp 
Protein Length365 aa 
Translation table11 
GC content63% 
IMG OID642668629 
ProductABC transporter related 
Protein accessionYP_001943060 
Protein GI189346531 
COG category[H] Coenzyme transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG1120] ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.0737536 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACAACA GCATACTGCA GACCAGGGAT CTGGCCATCG GGTATCCCGC CGGAAAGAGG 
CTTGGGATGT CCGGAAACCG ACGATCGGGC AAGAGGTCGA AGATCGTCGC GGAAGACATG 
TCCCTCGAGC TGCGTGAAGG CGAGCTGGTA TGCCTGCTCG GCCCGAACGG ATCGGGCAAG 
TCAACCCTCA TGAGAACGCT TGCCGGCGTG CAGAAGCCGC TCGGCGGTGA GGTGCTGCTT 
TCGGGAACGC GTCTCGACCG TCTTTCGGCA AGAGATGGCG CCCGGCTGCT CAGCCTGGTG 
CTGACCGACA AGGTGCTGAC CGGCAATCTT TCGGTCTATG CGCTTGTGGC GCTTGGCCGC 
TATCCCTATA CGGGGTGGGC GGGGAACCTC TCGACCCGGG ACGAAGCGGT GGTCCGCCAT 
GCCATTGAAA CAACCGGAAC CAGGATGTTC GCGCACCGGC ATCTCGGCGA TCTGAGCGAC 
GGGGAGCGCC AGAAGGTGAT GATCGCCCGT GCAATCGCCC AGGATACGCC GGTCATCATG 
CTCGATGAAC CCACCGCGCA TCTCGACCTT CCCAACCGGC TCGAGATCGT CAGGCTTCTG 
AAAATGCTGG CCCGCGAGCA GAAAAAAGCC ATCGTGCTCT CGACGCACGA ACTCGATATG 
GCCCTGCAGA CTGCCGACAG GATCTGGCTG ATGCGGCCCG TCGATGCCCC TCACGGAGAG 
CGGAAGTCAT CGATAGTTTC CGGCATTCCC GAATCACTCG TGCTCGACGG TCAGCTGGAG 
CAGGCGTTCA GGCGAAAGGG GTTCGAGTTC GATCTCCACT CCGGATCGTT CCGCTTCCGT 
CACGATGCAG AGCGGACGAT CGGCCTTGTC GGCGATGGCG TGCGGGCATA CTGGACCCGG 
AGAGCACTCG AGCGGATCGG CTGCAGGGTG GTGCCGGGAA CGGCAGCCCC GCAGCATGTC 
GTGGTGGCCG GCGAGAACGG AACCGGACAC TGGCAGTTCT TTGATGGCAG CACCCGCAAT 
CCCCACAAAC TTCAGGCTCT TTCCGACGTG CTGACGGCTG TCGGCGTGAG TGCCTCGTCA 
GGGGAGGTGG TCCGGTGA
 
Protein sequence
MNNSILQTRD LAIGYPAGKR LGMSGNRRSG KRSKIVAEDM SLELREGELV CLLGPNGSGK 
STLMRTLAGV QKPLGGEVLL SGTRLDRLSA RDGARLLSLV LTDKVLTGNL SVYALVALGR 
YPYTGWAGNL STRDEAVVRH AIETTGTRMF AHRHLGDLSD GERQKVMIAR AIAQDTPVIM 
LDEPTAHLDL PNRLEIVRLL KMLAREQKKA IVLSTHELDM ALQTADRIWL MRPVDAPHGE 
RKSSIVSGIP ESLVLDGQLE QAFRRKGFEF DLHSGSFRFR HDAERTIGLV GDGVRAYWTR 
RALERIGCRV VPGTAAPQHV VVAGENGTGH WQFFDGSTRN PHKLQALSDV LTAVGVSASS 
GEVVR