| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Clim_0964 |
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| Symbol | truA |
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| ID | 6355413 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium limicola DSM 245 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010803 |
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| Strand | + |
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| Start bp | 1055167 |
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| End bp | 1055898 |
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| Gene Length | 732 bp |
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| Protein Length | 243 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 642668588 |
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| Product | tRNA pseudouridine synthase A |
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| Protein accession | YP_001943019 |
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| Protein GI | 189346490 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0101] Pseudouridylate synthase |
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| TIGRFAM ID | [TIGR00071] pseudouridylate synthase I |
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAGAACA TACGCTTCGA TGTTGAATAT GACGGCACTG ACTTTTGTGG ATGGCAGAGG
CAGCCAGGCG GTATTCAAAC CCTTCAGGGA GAACTTGAAG CGCAGCTCGG TCGGATTCTT
CAGGAGAACA TCTCGCTTAC CGCTGCAGGC AGAACCGATA AAGGCGTACA TGCGCGTTTG
CAGGTCGTGA ATTTCATGAC CGGATCGGCA ATGGAGCTTT CAAAAATGGC TCATGCGCTT
AATTCGCTGC TTCCTGACAC TGTCAGGGTA AGCAATCCTC ACGTTGTGCC GCTCGATTTT
CATGCGAGGT TCAGTGCAAA AGAGCGGGAA TACCGGTATT TTCTCCTTGA AGAACCCTCC
GCGTTGCGAT GCAGGTTCAC CGGCTGCTCA AAAGGATCTC TCCATATTGG CGTCATGCAG
GATGCCGCCG GCTTGCTGGT CGGCGAGCAT GATTTTCTCC TTCTGTCAAA AGAGCCTGCC
GATAAAAAAA ATCCGGTTTG CCTGATAAAA GAGTGTGAGT GGCAGGAGGA GAACGGCGTT
TTTGTTTTCC GGATACGAGC GAACCGGTTT CTTCGTTCGA TGGTGCGGTA TCTGGTCGGC
GTGATGATTG CTGTCGGCAG GGGCAGAGCT GTGCCGGAAG ACCTCGGTAT GCTTCTTGAT
GACGGTTTGA TGACTTTTCC GCTTTTTCCT GCTGAGCCGA ACGGGCTTTT TTTATGGGAT
GTTTCCTACT GA
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| Protein sequence | MKNIRFDVEY DGTDFCGWQR QPGGIQTLQG ELEAQLGRIL QENISLTAAG RTDKGVHARL
QVVNFMTGSA MELSKMAHAL NSLLPDTVRV SNPHVVPLDF HARFSAKERE YRYFLLEEPS
ALRCRFTGCS KGSLHIGVMQ DAAGLLVGEH DFLLLSKEPA DKKNPVCLIK ECEWQEENGV
FVFRIRANRF LRSMVRYLVG VMIAVGRGRA VPEDLGMLLD DGLMTFPLFP AEPNGLFLWD
VSY
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