| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Clim_0873 |
|---|
| Symbol | ksgA |
|---|
| ID | 6354108 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium limicola DSM 245 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010803 |
|---|
| Strand | - |
|---|
| Start bp | 956603 |
|---|
| End bp | 957394 |
|---|
| Gene Length | 792 bp |
|---|
| Protein Length | 263 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 642668498 |
|---|
| Product | dimethyladenosine transferase |
|---|
| Protein accession | YP_001942931 |
|---|
| Protein GI | 189346402 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0030] Dimethyladenosine transferase (rRNA methylation) |
|---|
| TIGRFAM ID | [TIGR00755] dimethyladenosine transferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 37 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACAAAAG TTGAATATAA GCATACAGAA ATAGCGGTAA AAAAACAATT AGGGCAAAAC
TTTCTCACCG ACCGAAATAT CACAAGAAAA ATCGTTCGCC TGTCCGGAGC AAAGCCGGAA
GAAAACATCC TGGAAATCGG GCCTGGATTC GGAGCGCTGA CAAAAGAAAT TATTGAGGTC
TGCCCTTCAT TCACGGTTGT GGAAAAAGAT CCGAAACTCG CGGCATTCAT CCGTACGGAG
TACCCGCAAC TCAACGTCAT CGAAGCCGAT TTCCTCAAAA TCGATCTTGA AGCTGTTACC
GGCGCCAGAA AACTCAGGAT TCTCGGCAAC ATCCCCTACT CCATAACAAG CCCGATCCTT
TTCAGGCTTC TTGAGTACAG GCGCTGCTTT ATGCATGCGA CCCTTATGAT GCAGCATGAA
GTAGCCATGC GCATCGTAGC CGTACCATCA ACCAAGGAGT ATGGCATTCT GGCCGTGCAG
CTTCAGGCTT TTTTCGATGT CTCCTACGGA TTCAGGGTGG GACGCAAAGT CTTTAAACCC
CAGCCCGGAG TGGACAGCGC GGTCATCACC ATAACGCCGA AAGAACACGT TCCGCTCAGC
GATCCCGAAG GGTTCAGTCG TTTTGTCCGC TGCGCTTTTC ACCAGCGACG CAAAACCCTG
CTGAACAACC TGAAAGAGAG TTACAACCTC GACGCGGTTC CTTCGGAAGT GCTGAAAAGA
CGCGCAGAAG CACTTGCAAT ACAGGAGCTT TTCGAGTTGT TCAAAGAGAT GAAGCCAAAG
ATGTTGTCAT GA
|
|---|
| Protein sequence | MTKVEYKHTE IAVKKQLGQN FLTDRNITRK IVRLSGAKPE ENILEIGPGF GALTKEIIEV
CPSFTVVEKD PKLAAFIRTE YPQLNVIEAD FLKIDLEAVT GARKLRILGN IPYSITSPIL
FRLLEYRRCF MHATLMMQHE VAMRIVAVPS TKEYGILAVQ LQAFFDVSYG FRVGRKVFKP
QPGVDSAVIT ITPKEHVPLS DPEGFSRFVR CAFHQRRKTL LNNLKESYNL DAVPSEVLKR
RAEALAIQEL FELFKEMKPK MLS
|
|---|
| |