Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Clim_0842 |
Symbol | |
ID | 6353914 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium limicola DSM 245 |
Kingdom | Bacteria |
Replicon accession | NC_010803 |
Strand | + |
Start bp | 924940 |
End bp | 925545 |
Gene Length | 606 bp |
Protein Length | 201 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 642668467 |
Product | TPR repeat-containing protein |
Protein accession | YP_001942900 |
Protein GI | 189346371 |
COG category | [R] General function prediction only |
COG ID | [COG4783] Putative Zn-dependent protease, contains TPR repeats |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATCTTGA ACGAGATAGA AAGATTTGAG GCCGAACTTC GTGAAAGTCC TGATGATTTC CGGAAACAGT ATGATCTTGC GCTCTGCTAT CTTCAGCATG AACGCAACAG CCAGGCGCTG GAGCTTCTCG ACAGGATGCT CGATAACGGG CGCCGTGATG CACAGGCCTA CTATGCCAGA GCTGTAGCCT ATCTATCCAT GAACAACTAT CGGAAAGCCG GGTGCGATTT TCTCAGAACC ATCGCACTCG ATCCTGATTT TCTTGAGGCG TACAAGCATC TGGGGTTCAT ACAGCTTACT CTCGGCAGGG AAGAGGCTGC GCTCAAAACC CTGAAAAACG CCCTTGAAAA AGATCCTGCC CATTCAGGTC TTTACTGCGT GCTTGGGGAT GTCTATCTCG ATATCGGTGA GCCCGAAAAG GCGAAAGACG CGTTCGAGAA AGCGTTCGAA CTTGCCCCGG AAGATGCGGA GCCGCACTGC AAGCTTGCCA TGTACTATGT ATCGAAAGGA GATATGAAAG GACTGAAAAG AGAGTATGAT ATTCTCAAGG ATCTTGACGC TGTGATGGCG GAGCAGATCG GAACCCTGTT TTTCCAGCCG TTATGA
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Protein sequence | MILNEIERFE AELRESPDDF RKQYDLALCY LQHERNSQAL ELLDRMLDNG RRDAQAYYAR AVAYLSMNNY RKAGCDFLRT IALDPDFLEA YKHLGFIQLT LGREEAALKT LKNALEKDPA HSGLYCVLGD VYLDIGEPEK AKDAFEKAFE LAPEDAEPHC KLAMYYVSKG DMKGLKREYD ILKDLDAVMA EQIGTLFFQP L
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