Gene Clim_0842 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagClim_0842 
Symbol 
ID6353914 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium limicola DSM 245 
KingdomBacteria 
Replicon accessionNC_010803 
Strand
Start bp924940 
End bp925545 
Gene Length606 bp 
Protein Length201 aa 
Translation table11 
GC content50% 
IMG OID642668467 
ProductTPR repeat-containing protein 
Protein accessionYP_001942900 
Protein GI189346371 
COG category[R] General function prediction only 
COG ID[COG4783] Putative Zn-dependent protease, contains TPR repeats 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCTTGA ACGAGATAGA AAGATTTGAG GCCGAACTTC GTGAAAGTCC TGATGATTTC 
CGGAAACAGT ATGATCTTGC GCTCTGCTAT CTTCAGCATG AACGCAACAG CCAGGCGCTG
GAGCTTCTCG ACAGGATGCT CGATAACGGG CGCCGTGATG CACAGGCCTA CTATGCCAGA
GCTGTAGCCT ATCTATCCAT GAACAACTAT CGGAAAGCCG GGTGCGATTT TCTCAGAACC
ATCGCACTCG ATCCTGATTT TCTTGAGGCG TACAAGCATC TGGGGTTCAT ACAGCTTACT
CTCGGCAGGG AAGAGGCTGC GCTCAAAACC CTGAAAAACG CCCTTGAAAA AGATCCTGCC
CATTCAGGTC TTTACTGCGT GCTTGGGGAT GTCTATCTCG ATATCGGTGA GCCCGAAAAG
GCGAAAGACG CGTTCGAGAA AGCGTTCGAA CTTGCCCCGG AAGATGCGGA GCCGCACTGC
AAGCTTGCCA TGTACTATGT ATCGAAAGGA GATATGAAAG GACTGAAAAG AGAGTATGAT
ATTCTCAAGG ATCTTGACGC TGTGATGGCG GAGCAGATCG GAACCCTGTT TTTCCAGCCG
TTATGA
 
Protein sequence
MILNEIERFE AELRESPDDF RKQYDLALCY LQHERNSQAL ELLDRMLDNG RRDAQAYYAR 
AVAYLSMNNY RKAGCDFLRT IALDPDFLEA YKHLGFIQLT LGREEAALKT LKNALEKDPA
HSGLYCVLGD VYLDIGEPEK AKDAFEKAFE LAPEDAEPHC KLAMYYVSKG DMKGLKREYD
ILKDLDAVMA EQIGTLFFQP L