| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Clim_0801 |
|---|
| Symbol | |
|---|
| ID | 6353871 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium limicola DSM 245 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010803 |
|---|
| Strand | + |
|---|
| Start bp | 877171 |
|---|
| End bp | 878046 |
|---|
| Gene Length | 876 bp |
|---|
| Protein Length | 291 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 642668425 |
|---|
| Product | protein of unknown function DUF125 transmembrane |
|---|
| Protein accession | YP_001942860 |
|---|
| Protein GI | 189346331 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1814] Uncharacterized membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 46 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAAACAGA GCAGGGATTT CGATACAAGA GAAGTTGCCG TTTTTCAGAA AAACGAGATC
ACCGAGCATT ACATCTATAA ATACCTGTCC GGCCGGGTGA GCGGCGTTAA AAATCGCCGT
ATTCTCAGTC AGATAGCCGA TGATGAGATG CGGCATTATA ATGTCTGGAA AACCTATACC
CGGAGGGATA TTGCCCCGAG CAGGCTGAAA GTTTGGTTTT ATACGTTTGT CAGCATGCTG
TTCGGTTTTA CCTTCGGGAT CAGGCTCATG GAAAAGTCCG AGCAGAACGC TCACAACACC
TATAACCGCA TGCCCGGAGC GTTCAAGGAG ATCAACGGCA TAATCCGGGA TGAAGAGGAG
CATGAACAGG CCCTGATAAC CCTGCTCGAT GAAGACCGAC TGAAATATAC CGGATCGATT
GTGCTTGGGC TGAACGATGC GCTTGTGGAG CTGATGGGTG TACTGGCCGG TCTTACCTTT
GCCCTGCAGA ACACCTCGCT TGTAGCGTTG ACCGCTTCCA TCACCGGTTT TGCCGCGGCG
CTTTCCATGG CGTCGTCGGA GTATCTCTCC ACCAAATCCG AGCCAGGCGG AAAAAATCCT
CTCAAGGCGG CGATTTATAC CGGATTTGCG TACATACTCA CGGTGCTGGT ACTCGTGGCA
CCTTACCTGT TTTTTACCGA TCTCTATCTC TGTCTCGGAA TGGCATTTGC GGCTTCGATA
TGTATTATCG GTTTCTTCAA TTTCTACATT GCCGTTGCGC AGGACGTTTC TTTCAAAAGC
AGGTTTTTTG AGATGGTGGG GCTCAGCTTT ACGGTTGCGG CACTGAGTTT TGCCGCCGGT
TACGGTATAA GGCTGGCTTT CGGCATAGAG GTTTAA
|
|---|
| Protein sequence | MKQSRDFDTR EVAVFQKNEI TEHYIYKYLS GRVSGVKNRR ILSQIADDEM RHYNVWKTYT
RRDIAPSRLK VWFYTFVSML FGFTFGIRLM EKSEQNAHNT YNRMPGAFKE INGIIRDEEE
HEQALITLLD EDRLKYTGSI VLGLNDALVE LMGVLAGLTF ALQNTSLVAL TASITGFAAA
LSMASSEYLS TKSEPGGKNP LKAAIYTGFA YILTVLVLVA PYLFFTDLYL CLGMAFAASI
CIIGFFNFYI AVAQDVSFKS RFFEMVGLSF TVAALSFAAG YGIRLAFGIE V
|
|---|
| |