| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Clim_0491 |
|---|
| Symbol | |
|---|
| ID | 6354838 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium limicola DSM 245 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010803 |
|---|
| Strand | - |
|---|
| Start bp | 555247 |
|---|
| End bp | 556446 |
|---|
| Gene Length | 1200 bp |
|---|
| Protein Length | 399 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 642668124 |
|---|
| Product | tryptophan synthase subunit beta |
|---|
| Protein accession | YP_001942563 |
|---|
| Protein GI | 189346034 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0133] Tryptophan synthase beta chain |
|---|
| TIGRFAM ID | [TIGR00263] tryptophan synthase, beta subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 42 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCCTCTT CTGCGTATTC TGCTCCCGAT GCCAAGGGAC ACTTCGGAGT TTTCGGCGGG
AAATTCATCC CCGAAACCCT GATAAAAAAC GCTTCAGATC TTGAATCGGA ATATCGGAAA
GCCAACAACG ATCCGTCGTT TCACGCGACA CTTGAAAACC TGCTTCGAGA CTACGTAGGA
CGCCCGACTC CCCTCTATCA TGCCGAAAGG CTGAGCAGGG CAGTTCAGGG CGCAGCAATC
TACCTGAAAC GCGAAGATCT CTGCCACACC GGAGCCCACA AGATCAACAA CGCCCTGGGG
CAAGCGCTTC TCGCCCGGCG GATGGGCAAA AAACGGATCA TAGCCGAAAC CGGTGCCGGT
CAGCATGGAG TTGCAACAGC TACGGTATGC GCACTGTTCG ATCTTGACTG CATTGTCTAT
ATGGGTGAAG AGGATATCAG GCGTCAGGCT CCCAATGTAG CAAGAATGAA GCTGCTCGGC
GCCGAGGTCC GGCCGGTCAC CTCCGGTTCC AGAACGCTCA AGGACGCTAC CAGCGAGGCC
ATTCGGGACT GGATGAACAA CCCGGAAGAG ACTTTTTATA TTATCGGTTC CGTCGTTGGC
ATGCATCCAT ACCCGATGAT CGTGCGTGAT TTTCAGGCGG TAATCGGCAA AGAAACCAGA
AAACAGATTC TTGAACAGGC AGGCAGACTG CCGGATGTCA TTACCGCATG CGTAGGGGGC
GGAAGCAATG CCATCGGCAT GTTCCATGAA TTTCTCGACG ATGTCCCGGC TATTGAGCTT
GTCGGAGTCG AAGCCGCCGG CGAAGGCCTC GAAGGCCTTC ATGCCGCATC ACTGACGCTC
GGAACCCCTG GTGTTCTGCA CGGAGCAATG ACCAAGCTGC TGCAAACCGA TGACGGCCAG
ATTCTCGAAG CCCACTCGAT ATCTGCCGGC CTCGACTATC CCGGCGTAGG GCCCGAACAC
TGCCACCTGC AGGAAACCGG ACTGGTCAGC TACACCTCGG CAACCGACCA TGAAGCGCTG
CTTGCACTCA AAACCCTTGC TGAAACCGAA GGGATCATCT GCGCCCTTGA ATCGGCGCAT
GCCGTGCACT ACGCAATCAA AAAGGCTGCG ACCATGAGCC CTGAATCCAT TCTCGTCGCG
AACCTTTCCG GACGCGGCGA CAAGGATATG AAAACCATTA TGGACTCCCT CAACCTCTGA
|
|---|
| Protein sequence | MSSSAYSAPD AKGHFGVFGG KFIPETLIKN ASDLESEYRK ANNDPSFHAT LENLLRDYVG
RPTPLYHAER LSRAVQGAAI YLKREDLCHT GAHKINNALG QALLARRMGK KRIIAETGAG
QHGVATATVC ALFDLDCIVY MGEEDIRRQA PNVARMKLLG AEVRPVTSGS RTLKDATSEA
IRDWMNNPEE TFYIIGSVVG MHPYPMIVRD FQAVIGKETR KQILEQAGRL PDVITACVGG
GSNAIGMFHE FLDDVPAIEL VGVEAAGEGL EGLHAASLTL GTPGVLHGAM TKLLQTDDGQ
ILEAHSISAG LDYPGVGPEH CHLQETGLVS YTSATDHEAL LALKTLAETE GIICALESAH
AVHYAIKKAA TMSPESILVA NLSGRGDKDM KTIMDSLNL
|
|---|
| |