Gene Clim_0378 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagClim_0378 
Symbol 
ID6354373 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium limicola DSM 245 
KingdomBacteria 
Replicon accessionNC_010803 
Strand
Start bp415951 
End bp417114 
Gene Length1164 bp 
Protein Length387 aa 
Translation table11 
GC content53% 
IMG OID642668009 
Productphosphate ABC transporter, inner membrane subunit PstA 
Protein accessionYP_001942450 
Protein GI189345921 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0581] ABC-type phosphate transport system, permease component 
TIGRFAM ID[TIGR00974] phosphate ABC transporter, permease protein PstA 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.706579 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGAGTT CTACCTTCAA TGATCGGCGG AAACGCAAAA GGCTTTCGAG GGAGCGCAGG 
TTCCGCTTCT ACGGCATTTC AGCCATCGTC ATGGCCATCT CTTTTCTTTT GTTTTTCTTC
GTCGATATTA TACAGAAAGG GTACAAGGCG TTTGCCATGA CGGAAATCCA CTCCGAAATG
GTCTATTCAC AGGATGCCGT AGAGATTCCG CAACTCGCCT TCCAGGAGGA TGTCCGTGAT
TTCGTGAGTT ACAGCGTAGC GAGAATGATT CCCTCCGATC TTGAACGCAA TCCATCGCTC
ATGGGAAAAA ACGTCGTGAA ATGGGTAGTG GCTTCCGACG AGGTCGATCA GTATGCAAAA
GGAAGCGTTA CTCGGCTTAC GGAGGATGAG CAGCGTCGGA TCGACGAGCT GAAACGGCAG
GGACGGTTAC GGCTCTCGTT CAATACCCGG TTTTTTGCCG CAGGTGATTC GAAACTGCCT
GAGGTCGCCG GAATTTTTTC AGCTGTGGTC GGCAGTCTTT ACGTGATTGC GCTGACGGTG
CTGTTTTCCG TGCCGATCGG CGTCATGTCG GCGCTTTATC TTCAGGAGTT CGCTCCGGAT
AACTTTCTGA CCCGGTTGAT AGAGGTCAAT ATCAGTAATC TCGCAGCTAT TCCTTCGATC
ATTTTCGGCT TGCTCGGCCT GTCGATATTC ATCAATTTCT TTGGCGTGCC GCGCTCTTCG
GCTCTGGCCG GAGGACTTAC GCTCGCCCTG ATGACCCTGC CGGTCATCAT TATCAGCACA
AGAGCTTCGA TTGGAGCGGT ACCCGATTCC ATCCGGCATG GCGCCTATGC CGTAGGCGCA
TCGAAGCTCC AGATGGTGCT GCACCATCTG CTTCCGCTTG CCGTCCCGGG GATCACGACC
GGTACCATTA TCGGCATAGC CAGGGCATTG GGTGAAACTG CTCCACTGCT CATTATCGGC
ATGATGGCCT ACATCCCGGA TATTCCTTCG GGCATTACCG AAGCGGCGAC GGTGCTGCCT
GCCCAGATTT ATACCTGGTC GTCAGCCTCC CAGCGGGCCT TCGTGGAAAA AACAGCCGCA
GGCATCATGG TACTGCTTGC CGTGATGCTG CTCCTTAACG CTACGGCGAT CTGGTTGAGA
AGAAAATATG AAATCAAGTG GTAG
 
Protein sequence
MESSTFNDRR KRKRLSRERR FRFYGISAIV MAISFLLFFF VDIIQKGYKA FAMTEIHSEM 
VYSQDAVEIP QLAFQEDVRD FVSYSVARMI PSDLERNPSL MGKNVVKWVV ASDEVDQYAK
GSVTRLTEDE QRRIDELKRQ GRLRLSFNTR FFAAGDSKLP EVAGIFSAVV GSLYVIALTV
LFSVPIGVMS ALYLQEFAPD NFLTRLIEVN ISNLAAIPSI IFGLLGLSIF INFFGVPRSS
ALAGGLTLAL MTLPVIIIST RASIGAVPDS IRHGAYAVGA SKLQMVLHHL LPLAVPGITT
GTIIGIARAL GETAPLLIIG MMAYIPDIPS GITEAATVLP AQIYTWSSAS QRAFVEKTAA
GIMVLLAVML LLNATAIWLR RKYEIKW