Gene Clim_0309 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagClim_0309 
Symbol 
ID6353826 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium limicola DSM 245 
KingdomBacteria 
Replicon accessionNC_010803 
Strand
Start bp343748 
End bp344482 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content52% 
IMG OID642667938 
ProductNucleotidyl transferase 
Protein accessionYP_001942382 
Protein GI189345853 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1207] N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains) 
TIGRFAM ID[TIGR01173] UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.241795 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCACTGG CAATCCTGAT TATGGCAGCA GGAAAAGGTA CCCGCATGAA ATCAGATCTG 
CCAAAAGTAC TGCACAAGGC AAACGGCAAG CCGGTCATCA ACTATGTACT TGATACGGCA
AGCAGCCTCC ATCCCGATAA AACCGTGCTT ATCGTCGGTC ATCAGGCTGA AAAGGTTATC
GATGCAACCC GAAGCTATCA GGTTATCTCC GTACTCCAGG AGCCCCAGCT TGGTACGGGA
CATGCAGTAA TGCAGGCGGA GCCGCATTTA GAAGCTTTTG CCGGCGACGT ACTGATTCTT
TCCGGAGACG CTCCCCTTGT CAGAACGGCT ACACTTGAGA AGCTTATTGC ATTTCATCGC
GAACAGCGTG CTGCGGCCAC CGTTCTCACG GCGAAGCTCG ATGATCCGGC GGGATATGGA
AGAATCATCA GAAACCGGGT GTCGGGAGAA GTGTTGAGGA TTGTTGAAGA AAAAGATGCC
TCGCCTGAAG AACGCCTGGT ACATGAAACC AATTCGGGCG TCTATGTCAT CGATGCGAAG
GCACTTTTCA GCGCGCTCAA GGAGATCCGT TCCGATAATG CGCAACGGGA GTATTATCTC
ACCGATGTGA TCGGCATCTG CTTCGGCAGA GGGAAAAAAG TCAGTGCGTG GAGCGTGGCT
GATCCGGATG AGATCCGCGG GATCAATACC CCGGAACAAC TCAGGGAAGC GGAAATAATT
CTCGAACAAC TCTGA
 
Protein sequence
MALAILIMAA GKGTRMKSDL PKVLHKANGK PVINYVLDTA SSLHPDKTVL IVGHQAEKVI 
DATRSYQVIS VLQEPQLGTG HAVMQAEPHL EAFAGDVLIL SGDAPLVRTA TLEKLIAFHR
EQRAAATVLT AKLDDPAGYG RIIRNRVSGE VLRIVEEKDA SPEERLVHET NSGVYVIDAK
ALFSALKEIR SDNAQREYYL TDVIGICFGR GKKVSAWSVA DPDEIRGINT PEQLREAEII
LEQL