Gene Clim_0258 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagClim_0258 
Symbol 
ID6353775 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium limicola DSM 245 
KingdomBacteria 
Replicon accessionNC_010803 
Strand- 
Start bp290618 
End bp291685 
Gene Length1068 bp 
Protein Length355 aa 
Translation table11 
GC content53% 
IMG OID642667888 
Productthiamine-monophosphate kinase 
Protein accessionYP_001942332 
Protein GI189345803 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0611] Thiamine monophosphate kinase 
TIGRFAM ID[TIGR01379] thiamine-monophosphate kinase 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.451362 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCATACA AAGCTATTTC AGATATAGGC GAATTCGGAC TGATCGACCG CCTTTCAAAA 
CTTGTCGAGC CGACCCTTGC TGAAGCTCCC TCCCTTCTCA AAGGTATCGG GGACGATTGC 
GCGGTCTACC GGATATCCGA ATACACCCTG CAGGTGGCCA CGACCGACCT GCTTGCCGAA 
CAGGTGCATT TCGATCTCCT GACCACTCCG CTCCGACATC TCGGCAGCAA ATGCATCAGC 
GTCAACGTCT CGGATATCTG TGCCATGAAT GCCCTGCCGA GTTTCGCGCT GATCAGCCTT 
GCCGTACCAC CCTCCTTTTC TGTTGCAATG ATAGAGGAAC TCTACCGGGG AATGAGCCAT 
GCCGCGTCAG AATACGGACT CGCCATTGCA GGAGGAGACA CCTCTTCATC CCGTTCCGGT 
CTGGTAATCA CGGTCTCCAT GACCGGTGAG ACGACTGACG AATGCATAAC CATGCGAAAA 
GGAGCAAAGC CCGGGGATCT GATCTGCGTA ACCGGCACGC TCGGCGGGGC CGCTGCCGGC 
CTGAAAGTGC TCATGCGCGA AAAAAACATC ATGCTCGACC ATCTTGCCAA TAACGAACCC 
TACAGTAAAA GCCTCATGGC AGACCTGCAG GAATACAGTA TTGCCATCCA GCATCAACTG 
CTGCCTGCTG CACGATCTGA CATCGTCAGA TTTCTGCATG CTTCAGCCAT TACGCCAACA 
GCGATGATCG ATCTTTCTGA CGGCATCAGC TCCGACCTCC GGCATCTCTG CATCAGCTCC 
GATACCGGCG CCGTCATATT TGAAAACAAA ATCCCGGTCA ATCCGCAGGC TCGGGAAATC 
GCCGATGAAC TGCAGGAAGA CGTTATCACC TGGTCTCTGG CCGGGGGAGA AGACTATGAA 
TTGCTCTTTA CCCTGCCGAA AGAACAGAGA GAAACGGTCG AAAGACACAA GGATATATCC 
ATAATCGGAG AGATAACGGA TAAAAAGTCA GGAATCCTGC TGACCGACAT CTACGGAATG 
ACGATCAACC TCGGTGATCT CGCCGGTTTT GATCATTTCA GGAAATAA
 
Protein sequence
MPYKAISDIG EFGLIDRLSK LVEPTLAEAP SLLKGIGDDC AVYRISEYTL QVATTDLLAE 
QVHFDLLTTP LRHLGSKCIS VNVSDICAMN ALPSFALISL AVPPSFSVAM IEELYRGMSH 
AASEYGLAIA GGDTSSSRSG LVITVSMTGE TTDECITMRK GAKPGDLICV TGTLGGAAAG 
LKVLMREKNI MLDHLANNEP YSKSLMADLQ EYSIAIQHQL LPAARSDIVR FLHASAITPT 
AMIDLSDGIS SDLRHLCISS DTGAVIFENK IPVNPQAREI ADELQEDVIT WSLAGGEDYE 
LLFTLPKEQR ETVERHKDIS IIGEITDKKS GILLTDIYGM TINLGDLAGF DHFRK