Gene Clim_0164 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagClim_0164 
Symbol 
ID6356134 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium limicola DSM 245 
KingdomBacteria 
Replicon accessionNC_010803 
Strand
Start bp183404 
End bp184225 
Gene Length822 bp 
Protein Length273 aa 
Translation table11 
GC content52% 
IMG OID642667791 
ProductRibonuclease III 
Protein accessionYP_001942242 
Protein GI189345713 
COG category[K] Transcription 
COG ID[COG0571] dsRNA-specific ribonuclease 
TIGRFAM ID[TIGR02191] ribonuclease III, bacterial 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.233205 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGCAGT TCTGGCAAAA ACTGACAGCT TTTGCTTTTC ATCGCTCTCA GCAGTTTGAC 
AAGGGTGAGC ATGCACCCCG AGACGGCTCG GATGTAACGC TGCCGGAACC TCTGCAGACA
TTTGTAGCGG TTGTAACGGG CTCTGCCGGA AATGAGCCTG CTCTGTATCT GACTGCCCTG
ACCCATCGTT CCGTCACACA CGACGCCTCG GTTCCGGGAA CCGAATCCAA TCAGCGTCTC
GAATTTCTTG GAGACGCAGT TCTCGATATG GTCATATCGG AATATCTCTA CCGCTCATTC
CCAAACAGCG CAGAAGGCGA CCTGTCGAGC AACAGGGCAA AAATCGTCAA CAGAAAATCT
CTTGCCGGTT TTGCGCAAAC CATGGGACTG GGCAACTATC TCATTATCGG AGAATCAGCA
GACTGCAACA AAATCAGAAC CAGTGAATCG GCTCTTGCCG ATGCGTTCGA ATCCCTCACC
GGCGCGATTT ATCTCGACAA GGGACTTGAT GCCGTACGTG CCTTCGTCAT GAAACAGGTC
ATCGAACATG TTGATTTCAA AACCATCGTT GCATCCGAAC ACAACTATAA AAGCCGACTG
ATCGAATACA CCCAGTCACA TCACATCCCT CCTCCGGTTT ATACGGTCAT TGCCCAGGAT
GGCGCTGAAC ATGAAAAGGT TTTCACCATC GAAGTCTCCT GTGCCGGCTG CAGCTGCGGC
AGGGGATCCG CTCCGAGAAA AAAAGATGCC GAACAGCTTG CCGCGAAAGA AGCTGTCGAG
ATGCTCCTGC ATGCGGAACA GAGCGCATTG CCGGAACCAT AA
 
Protein sequence
MEQFWQKLTA FAFHRSQQFD KGEHAPRDGS DVTLPEPLQT FVAVVTGSAG NEPALYLTAL 
THRSVTHDAS VPGTESNQRL EFLGDAVLDM VISEYLYRSF PNSAEGDLSS NRAKIVNRKS
LAGFAQTMGL GNYLIIGESA DCNKIRTSES ALADAFESLT GAIYLDKGLD AVRAFVMKQV
IEHVDFKTIV ASEHNYKSRL IEYTQSHHIP PPVYTVIAQD GAEHEKVFTI EVSCAGCSCG
RGSAPRKKDA EQLAAKEAVE MLLHAEQSAL PEP