Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Clim_0164 |
Symbol | |
ID | 6356134 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium limicola DSM 245 |
Kingdom | Bacteria |
Replicon accession | NC_010803 |
Strand | - |
Start bp | 183404 |
End bp | 184225 |
Gene Length | 822 bp |
Protein Length | 273 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 642667791 |
Product | Ribonuclease III |
Protein accession | YP_001942242 |
Protein GI | 189345713 |
COG category | [K] Transcription |
COG ID | [COG0571] dsRNA-specific ribonuclease |
TIGRFAM ID | [TIGR02191] ribonuclease III, bacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.233205 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAGCAGT TCTGGCAAAA ACTGACAGCT TTTGCTTTTC ATCGCTCTCA GCAGTTTGAC AAGGGTGAGC ATGCACCCCG AGACGGCTCG GATGTAACGC TGCCGGAACC TCTGCAGACA TTTGTAGCGG TTGTAACGGG CTCTGCCGGA AATGAGCCTG CTCTGTATCT GACTGCCCTG ACCCATCGTT CCGTCACACA CGACGCCTCG GTTCCGGGAA CCGAATCCAA TCAGCGTCTC GAATTTCTTG GAGACGCAGT TCTCGATATG GTCATATCGG AATATCTCTA CCGCTCATTC CCAAACAGCG CAGAAGGCGA CCTGTCGAGC AACAGGGCAA AAATCGTCAA CAGAAAATCT CTTGCCGGTT TTGCGCAAAC CATGGGACTG GGCAACTATC TCATTATCGG AGAATCAGCA GACTGCAACA AAATCAGAAC CAGTGAATCG GCTCTTGCCG ATGCGTTCGA ATCCCTCACC GGCGCGATTT ATCTCGACAA GGGACTTGAT GCCGTACGTG CCTTCGTCAT GAAACAGGTC ATCGAACATG TTGATTTCAA AACCATCGTT GCATCCGAAC ACAACTATAA AAGCCGACTG ATCGAATACA CCCAGTCACA TCACATCCCT CCTCCGGTTT ATACGGTCAT TGCCCAGGAT GGCGCTGAAC ATGAAAAGGT TTTCACCATC GAAGTCTCCT GTGCCGGCTG CAGCTGCGGC AGGGGATCCG CTCCGAGAAA AAAAGATGCC GAACAGCTTG CCGCGAAAGA AGCTGTCGAG ATGCTCCTGC ATGCGGAACA GAGCGCATTG CCGGAACCAT AA
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Protein sequence | MEQFWQKLTA FAFHRSQQFD KGEHAPRDGS DVTLPEPLQT FVAVVTGSAG NEPALYLTAL THRSVTHDAS VPGTESNQRL EFLGDAVLDM VISEYLYRSF PNSAEGDLSS NRAKIVNRKS LAGFAQTMGL GNYLIIGESA DCNKIRTSES ALADAFESLT GAIYLDKGLD AVRAFVMKQV IEHVDFKTIV ASEHNYKSRL IEYTQSHHIP PPVYTVIAQD GAEHEKVFTI EVSCAGCSCG RGSAPRKKDA EQLAAKEAVE MLLHAEQSAL PEP
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