| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Clim_0027 |
|---|
| Symbol | |
|---|
| ID | 6355549 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium limicola DSM 245 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010803 |
|---|
| Strand | - |
|---|
| Start bp | 30825 |
|---|
| End bp | 31787 |
|---|
| Gene Length | 963 bp |
|---|
| Protein Length | 320 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 642667651 |
|---|
| Product | Muramoyltetrapeptide carboxypeptidase |
|---|
| Protein accession | YP_001942114 |
|---|
| Protein GI | 189345585 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1619] Uncharacterized proteins, homologs of microcin C7 resistance protein MccF |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTTTTTG CTTATATGAA AACGCTTGTA CCGAACGCCC TGCGCAGGGG AGATACCATC
GGGCTCATAT CTCCCTCATC CCACTGCTCT TACCCCGATA GGATCCAGCT GGCTGTGTCG
TATCTTGAAA AGAACGGTTA CCGGGTCAAG CCATCCGTTC ATCTCAACCG CATCGATACC
GACCCGTCAA TAGCCGATGC AGAGAAGCTG CAGGATCTGC ATGGGATGTT CAGCGACCCC
TCGATACGAG CGATCATCTG CCTGAGAGGA GGAGCCGGAG CCTCCCGTCT GCTGAAAAAA
ATCGACTACA ATCTCATTGC ATCGAATCCG AAAATCCTTG TCGGGTATTC CGACATCACA
GCTCTCTCGC TTGCCGTTTT TTCTCAGACA GGTCTGATCA GTTTTTCCGG ACCGATGCTG
GCAACCGAAC TGCACGAGCC TACGCCCTAT ACCGAAGAAC ACTTCTGGGG CATTCTGACA
GCTCCGGCTT ATGCCCGTTC TCTTCATAAC CATGAAAGCC ACGCAATCAC CTGTATCAGG
GAAGGAGTGG CTGAAGGACG CCTCATCGGA GGCAACCTCT CCGTCCTCTC GTCCATGATC
GGCACGCCCT ACCTCCCGGC TTTCTGCGAA ACGCTGCTCT TTCTTGAGGA TATCAATGAG
CCGGCCTACC GTATTGACAG AATGCTCTCG CATCTCGGCA ATGCCGGCCT TCTTGCTGAA
AGCAGCGGCA TCCTTTTCGG CCAGTTCAGC GGCGAACCGG AAAAAGCAGG CGAGGCTCTC
AGGCTGGAAA AAATGTTCGA CTATTACAGC GCACCGGCTC ATATTAACGG GCCGGCAATG
AGAGGGCTCT CTTACGGCCA TATACGAAAC CTCATGACCA TTCCCATAGG AGCGAAATTC
CGAATGGAAA TTTCGGCATC GACATTCAGC CTTAAGGCTC TCGAACCGGT CGTACAGGAA
TAA
|
|---|
| Protein sequence | MFFAYMKTLV PNALRRGDTI GLISPSSHCS YPDRIQLAVS YLEKNGYRVK PSVHLNRIDT
DPSIADAEKL QDLHGMFSDP SIRAIICLRG GAGASRLLKK IDYNLIASNP KILVGYSDIT
ALSLAVFSQT GLISFSGPML ATELHEPTPY TEEHFWGILT APAYARSLHN HESHAITCIR
EGVAEGRLIG GNLSVLSSMI GTPYLPAFCE TLLFLEDINE PAYRIDRMLS HLGNAGLLAE
SSGILFGQFS GEPEKAGEAL RLEKMFDYYS APAHINGPAM RGLSYGHIRN LMTIPIGAKF
RMEISASTFS LKALEPVVQE
|
|---|
| |