Gene Cla_1546 details

Gene Information

• Locus tag: Cla_1546
• ID: 7411292
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Campylobacter lari RM2100
• Kingdom: Bacteria
• Replicon accession: NC_012039
• Strand: +
• Start bp: 1497363
• End bp: 1499345
• Gene Length: 1983 bp
• Protein Length: 660 aa
• Translation table: 11
• GC content: 31%
• IMG OID: 643718667
• Product: MCP-domain signal transduction protein
• Protein accession: YP_002576097
• Protein GI: 222824523
• COG category: [N] Cell motility; [T] Signal transduction mechanisms
• COG ID: [COG0840] Methyl-accepting chemotaxis protein

Plasmid Coverage information

• Num covering plasmid clones: 40
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTTTAATT TTCGAAGCTT ATCAAGTAAA CTTACTTTTA TAGTTGGATT GCTTATAATT 
GCTATTTTGA TTACAGTTAA TATTATTAGC TATTACCAAT CAAAAAATTC AACAAGTCAG 
TATCTTGAAG AAATTCAAGT GAAAACAATG TTTGATGTTA ACAAAGCATA TGAAATTTAT 
GGGACAAGTA AAAGAACTGC TATTGATTCG ATAGTAAAAT TTATGGAGAA AAATCCACAT 
CCAGATATTA ATGAGTTGTT TGATATTCTA GAAACCATTA GATACTCTGC TGGATATGAT 
GTAACTTATA TAGGTTTTGA AGAAGATGGA AAACTATACC AATCTAATAA AATCATAAGA 
AGTCCAGAAC AAACTGGTTT TGATGCAAGA ACAAGACCAT GGTATCAAGA AGCAAAAACA 
ACAGGAACAC TTGTAGTTTC TGATCCTTAT AAAAGTATTG AAGATGGTTC TATAACAATT 
TCCTACACAG CACCAATATA TGTAAATGGT AAACTTTTGG CTGTAGTTGG TGGAGATTAC 
AACCTTCATA CTTTTGCAAA AGATGTGCTT ATATTAGGTC ATTCTCAAAG TTCATATGCG 
GCAGTTTATG ATAAAGAAGG TCAAATTATT TTTCACGAAA ATAAAGATTT AATGCTTACT 
AAAAATGATC TAAGTATTAA TATAGCTAAT GCAGCCAAAG CCAACCCTGA TTTAATCGAT 
CCAAGCAAAG AAGATTCTTT ATTTTATGCA AAAGATGGTA ATAACAAAAT CCAAGTAGTA 
ACTTGTGTCC AAGCTTTAAA TCCTAAATAT ATGGTTTGTT CGATTACCGA TGAATCTGTA 
TATTCTGATG CAGTTAATGA AGTTTTATTC CAACAAGTTA TTATTGCATT TATAGCCATA 
ATCATAGCAT TAATATTGGT AAGATTTGCT ATTATAAAAA ATTTAAAACC TATTGCGGTA 
ATTACTGCCG GCCTTAACTC ATTCTTTGAT TTTATCAATC ATAAAACCAA AGATTCAGCT 
ATGATTAATG TTAATACAAA TGATGAACTA GGTGCTATGG CAAAAGCTAT CAATGAAAAC 
ATCACTAAAA CTAAAAATGC TTTAGAACAA GATGCTAAAG CAGTAGAACA ATCAGTTGAA 
ACAGCTAAAG AAATAGAAGC TGGTAATTTA ACAGCAAGAA TAACAGCTAT TCCTGCTAAT 
CCTCAATTAA TAGAATTAAA AAATGTATTA AATGATATGC TTAGTGTATT AGAAGAAAAA 
GTTGGTTCTA ATATGAATGA AATTAACCGT GTATTTGATA GCTATAAAGC ATTAGACTTT 
ACAACAGAAG TTGCTAATGC TAAAGGTGGG GTTGAAATAA CTACTAATGT ATTAGGTCAA 
GAAATAGTAG CTATGCTAAG ACAATCTTCT GAATTTGCTA ATTTACTTGC AACACAAAGT 
GGTAAATTAC AAAGTGCTGT TAGAGAATTA ACAGATTCTT CATCAAGCCA AGCTTCTTCT 
TTGGAAGAAA CAGCTGCTGC TTTAGAAGAG ATTACTTCTT CTATGCAAAA TGTATCTCAT 
AAAACAAGTG AAGTAATAGC TCAAAGTGAA GAGATTAAAA ATGTTACTTC TATAATAGGA 
GATATAGCTG ATCAAATTAA TCTACTTGCA TTAAATGCTG CTATAGAAGC TGCAAGAGCT 
GGAGAGCATG GTAGAGGCTT TGCTGTTGTT GCTGATGAAG TTAGAAATTT AGCTGAGAGA 
ACTCAAAAGT CTTTAGGTGA GATAGAAGCT AATACTAATA TCTTAGTTCA ATCTATCAAT 
GAAATGGGTG AGAGTATTAA AGAACAAACT ACAGGTATTA CTCAAATCAA TGATGCTGTA 
GCTCAAATTG ATCATGTAAC ACAAGAAAAT CTTAAAATAG CTAATGATAG TGCTGCAATA 
TCTGAAAATG TAAATAAAAT AGCCAATGAT ATCTTAGAGG ATGCTAAGAA GAAGAGGTTT 
TAG 

 

Protein sequence

MFNFRSLSSK LTFIVGLLII AILITVNIIS YYQSKNSTSQ YLEEIQVKTM FDVNKAYEIY 
GTSKRTAIDS IVKFMEKNPH PDINELFDIL ETIRYSAGYD VTYIGFEEDG KLYQSNKIIR 
SPEQTGFDAR TRPWYQEAKT TGTLVVSDPY KSIEDGSITI SYTAPIYVNG KLLAVVGGDY 
NLHTFAKDVL ILGHSQSSYA AVYDKEGQII FHENKDLMLT KNDLSINIAN AAKANPDLID 
PSKEDSLFYA KDGNNKIQVV TCVQALNPKY MVCSITDESV YSDAVNEVLF QQVIIAFIAI 
IIALILVRFA IIKNLKPIAV ITAGLNSFFD FINHKTKDSA MINVNTNDEL GAMAKAINEN 
ITKTKNALEQ DAKAVEQSVE TAKEIEAGNL TARITAIPAN PQLIELKNVL NDMLSVLEEK 
VGSNMNEINR VFDSYKALDF TTEVANAKGG VEITTNVLGQ EIVAMLRQSS EFANLLATQS 
GKLQSAVREL TDSSSSQASS LEETAAALEE ITSSMQNVSH KTSEVIAQSE EIKNVTSIIG 
DIADQINLLA LNAAIEAARA GEHGRGFAVV ADEVRNLAER TQKSLGEIEA NTNILVQSIN 
EMGESIKEQT TGITQINDAV AQIDHVTQEN LKIANDSAAI SENVNKIAND ILEDAKKKRF