| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cla_1533 |
|---|
| Symbol | gcp |
|---|
| ID | 7411279 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Campylobacter lari RM2100 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012039 |
|---|
| Strand | - |
|---|
| Start bp | 1487100 |
|---|
| End bp | 1488107 |
|---|
| Gene Length | 1008 bp |
|---|
| Protein Length | 335 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 33% |
|---|
| IMG OID | 643718654 |
|---|
| Product | putative DNA-binding/iron metalloprotein/AP endonuclease |
|---|
| Protein accession | YP_002576088 |
|---|
| Protein GI | 222824514 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0533] Metal-dependent proteases with possible chaperone activity |
|---|
| TIGRFAM ID | [TIGR00329] metallohydrolase, glycoprotease/Kae1 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 52 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAGCT TAATCCTTGC TATAGAAAGC TCTTGTGATG ATAGTTCTAT TGCAATTATT
GATAAAAATA CATATGAGTG TAAATTTCAT AAAAAAATCT CTCAAGAACA AGAACATAGC
CAATATGGCG GGGTTGTGCC TGAGCTTGCT GCAAGGTTAC ACACCCAAGC TTTGCCAAAT
ATTTTAAGTC AATGTGAAAA ATATTTTAAT AATTTATGTG CCATAGCAGT TACAAATGAG
CCTGGGCTTA GTGTGAGTTT GATAGGTGGG GTGGCTATGG CTAAGATACT TGCTATTAGT
TTAAATTTAC CATTAATTGC GATAAATCAC TTAAAAGGAC ATATCTACTC TATGTTTTTA
GGTAAAAAAG CTTGTTTTGA TATGGGCGTG TTGCTTGTAA GTGGTGGGCA TACCATGGTG
CTTTTTATTG ATAATCAAGG GCAAATTACA GAAATAGCAA GAACAAATGA TGATAGCTTT
GGAGAAAGTT TTGATAAAGT AGCTAAGATG ATGAATTTGG GCTATCCTGG TGGGGTTATC
ATAGAAAATT TAGCTAAAAA TGCAAAAGAA AGTAATTTAG AATTTAGCAT ACCCTTGCTT
CATTCTAAAG AATTAGCTTA TAGTTTTTCA GGCCTTAAAA ACCAAGTGCG CTTAGAAATT
TTAAAAGAAG AATTAACTCA AAGTAGAAAA AATCAAATCG CCTTTGCCTT TCAAAAAACA
GCTATAGCAC ATATTATGAA TAAGCTAGAA AAAATTTTTA AAGAGTATAA ATTTAAACGC
TTTGGTATAG TAGGTGGAGC TAGTGCAAAT TTAAGTTTAA GAAGTCAAAT AGAGCATTTG
TGTCAAAGCT ATCAGTGTGA GCTTTTACTT GCCCCACTTG AGTATTGTTC AGATAATGCT
TTGATGATAG CAAGAGCAGC ATGTGAAGCT TATGAGCGTA AAGAATTTGT AAGTATTGAA
GATGATCTTA TAAGCCCGAA GGTCAAAAAT TTACAAGGTG TATTATGA
|
|---|
| Protein sequence | MKSLILAIES SCDDSSIAII DKNTYECKFH KKISQEQEHS QYGGVVPELA ARLHTQALPN
ILSQCEKYFN NLCAIAVTNE PGLSVSLIGG VAMAKILAIS LNLPLIAINH LKGHIYSMFL
GKKACFDMGV LLVSGGHTMV LFIDNQGQIT EIARTNDDSF GESFDKVAKM MNLGYPGGVI
IENLAKNAKE SNLEFSIPLL HSKELAYSFS GLKNQVRLEI LKEELTQSRK NQIAFAFQKT
AIAHIMNKLE KIFKEYKFKR FGIVGGASAN LSLRSQIEHL CQSYQCELLL APLEYCSDNA
LMIARAACEA YERKEFVSIE DDLISPKVKN LQGVL
|
|---|
| |