Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cla_1379 |
Symbol | pepE |
ID | 7409885 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter lari RM2100 |
Kingdom | Bacteria |
Replicon accession | NC_012039 |
Strand | - |
Start bp | 1329654 |
End bp | 1330358 |
Gene Length | 705 bp |
Protein Length | 234 aa |
Translation table | 11 |
GC content | 30% |
IMG OID | 643718501 |
Product | peptidase E |
Protein accession | YP_002575946 |
Protein GI | 222824372 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG3340] Peptidase E |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 63 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCAAAAC TTCTACTTTT TAGTGCTTCT GGCTATAAAG ATAGCCCGTA TTTAAGCCAT ACTATCGAAT TTATAGATAC ATTTTTAAAA GAAAATGCAG CGATTGATGA GGACATACTT TTTATACCTT ATGCAGGTGT TAGAAGAAGC TATGACGCTT ATGAAGCTAA GGTAAAAGAT GGTTTAAAAA AAGATAATAT TAAATCTTTA CACCATTTTA GTGATAAAAA AGAAGCTATT TTAAATGCTA AGGTTTTTTT AGTGGGTGGT GGAAATAGCT TTATGTTGTT ATCTAAGCTT TATGAGTATG ATTTATTAGA AGTGTTAAAA GAGCGTATTA TAAATGGAGC TTGTTATATA GGTTGGAGTG CAGGATCTAA TATAGCAGGA AAAAGCATAA TGACTACCAA TGATATGCCT ATAATTATGC CAAAAAGTTT TGATAGTTTA GGCGTGTTTA AACATCAAAT CAATCCACAT TTTATAAGTG GTAAAATCGC TGGGCATAAT GGAGAAAGCA GAGAAGAGCG TTTGGAGGAA TTTTTAATCA CTAATCCTAA AGATATAGTA TATGCCATCC CTGAAGGTTC TGCCTTAAAA GTGCAAGGAG ATGTTTTAAA AATCGTAGGT CATCATGATA TTTTAAAAAT ACAATATCCT TTTGAGATCG AATATTTAAA AACTAATTGT GAATATAAAA TTTAA
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Protein sequence | MSKLLLFSAS GYKDSPYLSH TIEFIDTFLK ENAAIDEDIL FIPYAGVRRS YDAYEAKVKD GLKKDNIKSL HHFSDKKEAI LNAKVFLVGG GNSFMLLSKL YEYDLLEVLK ERIINGACYI GWSAGSNIAG KSIMTTNDMP IIMPKSFDSL GVFKHQINPH FISGKIAGHN GESREERLEE FLITNPKDIV YAIPEGSALK VQGDVLKIVG HHDILKIQYP FEIEYLKTNC EYKI
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