Gene Cla_1373 details

Gene Information

• Locus tag: Cla_1373
• Symbol: lpxB
• ID: 7409879
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Campylobacter lari RM2100
• Kingdom: Bacteria
• Replicon accession: NC_012039
• Strand: -
• Start bp: 1323586
• End bp: 1324680
• Gene Length: 1095 bp
• Protein Length: 364 aa
• Translation table: 11
• GC content: 27%
• IMG OID: 643718495
• Product: ipid-A-disaccharide synthase
• Protein accession: YP_002575940
• Protein GI: 222824366
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG0763] Lipid A disaccharide synthetase
• TIGRFAM ID: [TIGR00215] lipid-A-disaccharide synthase

Plasmid Coverage information

• Num covering plasmid clones: 53
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAACCT TTTTAGTTTG TGCTCTAGAG CCATCAGCAA ATTTGCATTT AAAAGAAGTT 
TTAAAAGCTT ATAAAGATGA ATATAAAGAA TTTGATTTAG TTGGAATTTA TGATGAGAGT 
TTGTGCGAAG AATTTAGTTT AAATTCTAAA CCACTTTATA GCTCACATGA ATTTAGCGCT 
ATGGGTTTTA TAGAAATTTT ACCACTTATT TTTAAAGCAA AAAAAGCTAT AAAAGAGCTT 
GTAAATTTAA GTTTTGAAAA AAATATAAAT GCGATTTTGT GTATAGATTC TCCTGCTTTT 
AATATACCTT TTGCAAAAGC TTTAAAAAAA GCAAATTCTA AAATAAAAAG AATTTATTAT 
ATATTACCTC AAGTTTGGGC TTGGAAAAAA GGACGCATTC CCATCATAGA AAGTTATTTT 
GATGTGCTAG CTTCTATTTT ACCTTTTGAT GATAAATTTT TTAGTAAAAG CACTTATGTA 
GGACATCCGC TCTTAGATGA GATAAAAGAA TTTAAAAATG AAGATGATAT AAAAAATATA 
TTTTCAAAAA AAGATGATGA AAAAATCATC GCTTTCTTAC CAGGTTCAAG AAAAAGCGAG 
ATAAAGCGTT TGATGCCTAT TTTTAAAGAT TTAAGCGCTA AATTTAATGG TAAAAAGATA 
CTTTGTGTAC CTGAGTTTAA TCTAAAAAAA TTAGATCTTT ATGGTGATAT TAGTGGTTTT 
GAAATTCAAA GCAATACTCC AAAAGTGCTT AAAAATGCTG ATTTTGCTTT TATTTGTAGT 
GGCACAGCTA CACTTGAAGC AGCCTTAGTT GGAACTCCTT TTGTGCTTGC TTATAAGGCT 
AAGGCTATAG ATATCTTTAT AGCAAAGCTT TTTGTGAAAT TAAAACATAT AGGCCTTGCA 
AATATTTTTT TAGATTTTGC AGGTAAAAAT GAGCTTAATC CTGAATTTTT ACAAAATGAA 
GTAAATGTAA AAAATTTATA TCAAGCTTAT ATTAAATATG ATTATAAGGC GTTTTTTGAT 
AAGGTTGATT TTTTAAAATC TTATTTAAAA TTTGCAAGTG CTAAAAATCT TGCAAAAATA 
TTATATGAAA TTTAA 

 

Protein sequence

MKTFLVCALE PSANLHLKEV LKAYKDEYKE FDLVGIYDES LCEEFSLNSK PLYSSHEFSA 
MGFIEILPLI FKAKKAIKEL VNLSFEKNIN AILCIDSPAF NIPFAKALKK ANSKIKRIYY 
ILPQVWAWKK GRIPIIESYF DVLASILPFD DKFFSKSTYV GHPLLDEIKE FKNEDDIKNI 
FSKKDDEKII AFLPGSRKSE IKRLMPIFKD LSAKFNGKKI LCVPEFNLKK LDLYGDISGF 
EIQSNTPKVL KNADFAFICS GTATLEAALV GTPFVLAYKA KAIDIFIAKL FVKLKHIGLA 
NIFLDFAGKN ELNPEFLQNE VNVKNLYQAY IKYDYKAFFD KVDFLKSYLK FASAKNLAKI 
LYEI