| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cla_1299 |
|---|
| Symbol | |
|---|
| ID | 7411032 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Campylobacter lari RM2100 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012039 |
|---|
| Strand | + |
|---|
| Start bp | 1252069 |
|---|
| End bp | 1253199 |
|---|
| Gene Length | 1131 bp |
|---|
| Protein Length | 376 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 31% |
|---|
| IMG OID | 643718423 |
|---|
| Product | aminotransferase, DegT/DnrJ/EryC1/StrS family |
|---|
| Protein accession | YP_002575868 |
|---|
| Protein GI | 222824294 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0399] Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis |
|---|
| TIGRFAM ID | [TIGR03588] UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 41 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATAACTT ATTCTCATCA AAATATCGAC GAAAAAGACA TACGAGTAGT TTGTGAGGCT
TTAAAAGATG ATTTTTTAAC CGGTGGAAAA AAAGTTGAAG AATTTGAGCA AGCTCTTTGT
GAATATGTGG GTGTAAAATA TGCTTGTGTG CTAAATTCAG CCACTTCTGC ATTGCATCTT
GCATATTTAT CTTTAAATGT TAAAGATAAA ATTGTTTTAA CAACCCCAAT AACCTTTGCT
GCAACTGCAA ATGCTGCTTT AATGGCAGGT GCTAGAGTTG AGTTCATAGA TGTAAAAAGC
GATGGGAATA TTGATGAAAA AAAACTTGCT TTAAGATTAA GCCAAGATGG CTCTAATATA
GGGGCAATTT GCGTGGTTGA TTTTGCGGGA AATAGCGTAG AAATGGATGA AATCTTAGCC
CTAGCTAAAC AATACCATAT CCCACTAATT GATGATGCAA GTCATGCTCT AGGTGCTATT
TATAAAGATC AAAAAGTAGG TTCTATGGCA GATTTAAGCA TATTTTCTTT TCATCCGGTT
AAACCTATCA CGACCTTTGA AGGTGGTGCG GTTGTTAGTA ATGATGAGGA ATTAATCTCA
AAAATAAAGC TTTTAAGAAG TCATGGCATA GTCAAAAAAA GACTTTGGGA TAGTGATATG
ATCGATTTAG GGTATAATTA TCGCTTAAGT GATGTAGCTT GTGCTTTAGG TGTAAATCAA
CTTAAAAAAC TTGATAATAT GCTAGAAAAA AGAGAACAAA TAACTAAATT TTACGATAGA
GAATTTGAAA AAAATCCTTA TTTTAGCACT ATAAAAATCA AAGATTATAA AAAAAGCTCA
AGACATTTAT ATCCCATTTT ACTTTTTCCT GAGTTTTATT GCCAAAAAGA GATTATTTTT
GAAAAATTAT TAAATTTGGG CATAGGTGTA CAAGTGCATT ACAAACCTAC TTATGAATTT
AGTTATTATA AAAACCTATA TGGAAATTTA TTCTTAGAAA ATGCGGATAA TTTTTACAAA
GCCGAGCTTA GCATACCGGC TCATCAAGAA ATGAGCTTAA AAGAAGCACA ATTTATTAAA
GATAGTTTAT TTAAGATTTT AGAAGAAACT AAAAAGGGAT GTTGTGAGTA A
|
|---|
| Protein sequence | MITYSHQNID EKDIRVVCEA LKDDFLTGGK KVEEFEQALC EYVGVKYACV LNSATSALHL
AYLSLNVKDK IVLTTPITFA ATANAALMAG ARVEFIDVKS DGNIDEKKLA LRLSQDGSNI
GAICVVDFAG NSVEMDEILA LAKQYHIPLI DDASHALGAI YKDQKVGSMA DLSIFSFHPV
KPITTFEGGA VVSNDEELIS KIKLLRSHGI VKKRLWDSDM IDLGYNYRLS DVACALGVNQ
LKKLDNMLEK REQITKFYDR EFEKNPYFST IKIKDYKKSS RHLYPILLFP EFYCQKEIIF
EKLLNLGIGV QVHYKPTYEF SYYKNLYGNL FLENADNFYK AELSIPAHQE MSLKEAQFIK
DSLFKILEET KKGCCE
|
|---|
| |