Gene Cla_1168 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCla_1168 
Symbol 
ID7410332 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCampylobacter lari RM2100 
KingdomBacteria 
Replicon accessionNC_012039 
Strand
Start bp1118053 
End bp1119474 
Gene Length1422 bp 
Protein Length473 aa 
Translation table11 
GC content26% 
IMG OID643718294 
Productconserved hypothetical integral membrane protein (YHS domain protein) 
Protein accessionYP_002575741 
Protein GI222824167 
COG category[S] Function unknown 
COG ID[COG4393] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value0.657748 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGATTT ATTTTGTACA TTTTTTTGGA GCATTTTTTT CTTATGCGCT TTTGAGTGCT 
TTATTTTTTT ATAATCTAAA AAATTCTTTA GTGTTTAAAC TTGCTTTTGT GGGTTTTGTT
TTTTCTTATT TTGCTTTTTT TATTAGTGCT AAAACACTAA GTTATGATTT GTTATATTTT
TCTAATGATA TTTTATTTGT TTTATTGTTT TTGGGAGTTA TCATTTTTTC TTTTATAAAA
AATAATTTTT TAAAAGAAAA AATTCAAGCA ATATTGCTTT TTTTATTATC TTTTGCTTTT
GGTATAAAAT ATTTACATAT TTCTATTGAT TTTCCTATAT TAAGCACTAA TTTTTTAGAT
TCTTTAGCGA TTAGTTCTTT TGGGCTTATT TTGCTTGCTT TTATTATGTG TTTTGGGGTT
TATCTTTTTA TGAGGTGGCT AAGAGAATTT AAATTTAAGT TTTTAAATTT ATTTTTATTT
GTTATCGTGA TTTTTTATCT AAATGAAGCT TTAGCACAAA TTTTATTACA CCTTATGAGA
GAAGGCGTGG TAGAAACAGA AAGCTTGTAT TTAAGCTATG TGGCAAAAAG TGTATATTAT
GCTAAATTTT ATACTTATGT ATGGTTTGTG TTGTTAGGAC TTTGTGTCGT TTTAGCTCTA
AAACAAAGAG TAGGAGAAAA CACCAAGAAA AAAGATTTTG ATATAGAATT TAGAAAAAAT
CAAGCAAAAA ATTCAACTAT AACTAGTTTT AGTGCAAGTA TTTTTAGTGC TATGATTTTA
AGTCTTTGTA TTTTTCTTTT TTATGACTTG CATGCTTCAA GACCGGTAAC CATAGATGAA
CCAACCTATG TAGAGCCAAA TGAAAATGAT GAATTTGTCT TTGATGTAGC GATTTTAAGA
GATAACAACT TACATCGCTT TGCTTATATT AGCGATGAGG GTAAAGTGGT GAGATTTTTC
TTAATTAATA AAAGAGAAGA TAAAGACTCT CCAGTAGCAG TTTTTGATGC TTGTAGTATA
TGTGGGGATA TGGGGTATGT TAAAAAAGGT GGAGAATTAA TTTGCATCTC ATGTAATGTT
AGAATTTTCT TACCAAGTGT AGGTAAAGCA GGTGGGTGTA ATCCTATCCC TATGAAGTAT
AAATTTGAAA ATGGTAAAGT TATTATACCT TTTTCAGAAA TTTTAGATGG GGTAAATTTT
TTCACTCAAG TAGTAGAAAA GAAAGTTTAT GACCCTATTG ATCATACTGA ATTAATTAAT
TTGAAAGCAC CAAGATCTTA TGTTTATAAA GGTAGAACAT ATTTTTTTGC GAATGAAAAA
AATTATGAAG AGTTTAAAAA TGATCCTTTA AAATACATCG ATATGAATAA GACTTCAAAA
TATAGAATTC ATAATTTATT AGGAAATGAC TATGCAAGTT AA
 
Protein sequence
MSIYFVHFFG AFFSYALLSA LFFYNLKNSL VFKLAFVGFV FSYFAFFISA KTLSYDLLYF 
SNDILFVLLF LGVIIFSFIK NNFLKEKIQA ILLFLLSFAF GIKYLHISID FPILSTNFLD
SLAISSFGLI LLAFIMCFGV YLFMRWLREF KFKFLNLFLF VIVIFYLNEA LAQILLHLMR
EGVVETESLY LSYVAKSVYY AKFYTYVWFV LLGLCVVLAL KQRVGENTKK KDFDIEFRKN
QAKNSTITSF SASIFSAMIL SLCIFLFYDL HASRPVTIDE PTYVEPNEND EFVFDVAILR
DNNLHRFAYI SDEGKVVRFF LINKREDKDS PVAVFDACSI CGDMGYVKKG GELICISCNV
RIFLPSVGKA GGCNPIPMKY KFENGKVIIP FSEILDGVNF FTQVVEKKVY DPIDHTELIN
LKAPRSYVYK GRTYFFANEK NYEEFKNDPL KYIDMNKTSK YRIHNLLGND YAS