| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cla_1120 |
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| Symbol | |
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| ID | 7410854 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Campylobacter lari RM2100 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012039 |
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| Strand | + |
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| Start bp | 1073390 |
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| End bp | 1074724 |
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| Gene Length | 1335 bp |
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| Protein Length | 444 aa |
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| Translation table | 11 |
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| GC content | 28% |
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| IMG OID | 643718246 |
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| Product | MATE efflux family protein |
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| Protein accession | YP_002575693 |
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| Protein GI | 222824119 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0534] Na+-driven multidrug efflux pump |
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| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 39 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCAATAC ATAATTTTTA TGCTACATCA AATCCTACCA AACTTTTTAT AAAATGCGCT
CTACCAAATA TGGCTAGTAT GGCTTTTATT TATCTTTATG TGATTATTGA TGGAATTTTT
GTTGGAAGAT ATTTGGGCTC AGATGCACTT GCTGCTATGA ATTTAATGAT GCCTTTTATC
ATGATAAGCT TTGCCCTAGC TGACATGATA GCTATAGGAT CATCAGTACA AATAGCTATT
AATCTTGGCA AAGAAAAAGT TGAAAAAGCA AGAGCTATTT TTTCTTTTTG CATAGTTCTT
ATTTTTGCAA TTTCTTGCTT AATGGGAATT TTAGGATTTT TCTTAGCACA AGCACTAAGT
GCTTTTATGG GAGCTGATGA GAATATTCAA AACTTATCTA CTGAATATAT GCAAATTTTT
GCTATTTTTG CTCCCTTTAC TATGTTAGCT TTTGCTATGG ATAATTATCT TAGGATTTGT
GGGAAAAATT TTTATAGCAT GATAGTTAAT GTAGTTACTG CTTTGAGTAA TATTTTTCTT
GATTGGCTTT TTATAGTGGT TTTTGATTGG GGGCTTTTTT CAGCAGCTTT AGCAACTTGT
ATAGGTATGT TTTTAGGAAG TATTTTAGGG ATATTACCTT TTGTTTTTAA GGATTTGGTT
TTAAAATTTA AAAAACCAAT AATCAAACTA CAAATACTAA AAAATATACT CTATAATGGC
TCATCTGAAT TTTTTTCTAA TATTTCTAGC TCTTTTTATA CTATCTTAGC TAATGCTTTT
TTGCTTGAAC TTTCTGGAAA TACAGCTGTT GCAGCATTTT CAGTGATTTT ATACCTTAGC
ACTTTTATTT TTATGTTAAT TTTAGCAATG TGTGATGCTA TGCAACCTGC ATTAAGTTAT
AATTATGGGC ACAAAAATAT TGCAAGAATT CAAGCTATTT TTAAAAGAAT ATTTTTTGCT
TCTTGGATTG TAAGCATAGT AGTATTTTTA CTTGTGTATT TTTTTAATGA TATTTTAGTA
AACATTTTTA ATAAAGATAA TAACCAAAAT TTTGCCCACA TAGCACAAAA TGCTTTATAT
TTGTTTTGTT TTTCATTTTT ATTTTCATGG TTTGGAAAAA TTTGTGCATC ATTTTTTACA
GCACTTGATA AACCCTTATT ATCATTAGGA ATTTCTATTA CTCAAAGTCT TATTTTTCCA
AGTTTAGCTT TGCTTATACT AACGCATTTT TTAGGAATAA ATGGGGTTTG GCTAGCTACT
TTAGTGGGTG ATATTTGTAT GATTTTTATT GCTTCATTTT TTCTATATAA AACTTTTAAG
ACTCTAAGCT CTTAG
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| Protein sequence | MSIHNFYATS NPTKLFIKCA LPNMASMAFI YLYVIIDGIF VGRYLGSDAL AAMNLMMPFI
MISFALADMI AIGSSVQIAI NLGKEKVEKA RAIFSFCIVL IFAISCLMGI LGFFLAQALS
AFMGADENIQ NLSTEYMQIF AIFAPFTMLA FAMDNYLRIC GKNFYSMIVN VVTALSNIFL
DWLFIVVFDW GLFSAALATC IGMFLGSILG ILPFVFKDLV LKFKKPIIKL QILKNILYNG
SSEFFSNISS SFYTILANAF LLELSGNTAV AAFSVILYLS TFIFMLILAM CDAMQPALSY
NYGHKNIARI QAIFKRIFFA SWIVSIVVFL LVYFFNDILV NIFNKDNNQN FAHIAQNALY
LFCFSFLFSW FGKICASFFT ALDKPLLSLG ISITQSLIFP SLALLILTHF LGINGVWLAT
LVGDICMIFI ASFFLYKTFK TLSS
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