Gene Cla_0978 details

Gene Information

• Locus tag: Cla_0978
• Symbol: uppS
• ID: 7410558
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Campylobacter lari RM2100
• Kingdom: Bacteria
• Replicon accession: NC_012039
• Strand: -
• Start bp: 934096
• End bp: 934764
• Gene Length: 669 bp
• Protein Length: 222 aa
• Translation table: 11
• GC content: 27%
• IMG OID: 643718105
• Product: undecaprenyl diphosphate synthetase
• Protein accession: YP_002575552
• Protein GI: 222823978
• COG category: [I] Lipid transport and metabolism
• COG ID: [COG0020] Undecaprenyl pyrophosphate synthase
• TIGRFAM ID: [TIGR00055] undecaprenyl diphosphate synthase

Plasmid Coverage information

• Num covering plasmid clones: 44
• Plasmid unclonability p-value: 0.911321
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAATGAAT TAAAACATCT TGCTGTTGTA ATGGATGGTA ATAGAAGATG GGCTAGGAAA 
AATGGACTTT TAGAAAAAAT TGGCTATACC CAAGGAGCTA AGGTTGTTGA AAAAATTATA 
GAAGTTTGTG TTGATGAAAA AATTCAAAAT CTAACCCTTT ATGCTTTTAG CACAGAAAAT 
TGGCAAAGGC CAAAAGAGGA AGTTGAGTTT CTTTTTAAAT TATTAAATAA ATATCTTGAT 
GAATCTTTAA ATAAATTTAT AACGAATGAA GTGCGTTTTA AAGCTATAGG AAATTTAAGT 
CTTTTAGATG AATTAACCTT AAAAAAAATA CAAAATTTTC AAGAACAAAC TAAAAATTAC 
ACAAAATTGT GCGTAAATTT GGCTATTTCA TATGGGGGTA AAGATGAGAT AGTTAGAGCA 
GTTAAAAAGG TATTGGAAAA AAGTCTTGAA ATTAATGAAG AAAATATACA AGCAAATTTA 
GATTTAAGCG AAGATGTGGA TTTATTTTTA AGAGTAGGGA GCGCTAAGAG AATTTCAAAT 
TTTTTAATAT GGCAAACAAG TTATGCTGAA ATTTATTTTA GCCAGACTTT ATTTCCTGCA 
CTTACAAAAA AAGAAATCAC AAATATAATT ACTGATTTTA AAAAGCGTAA AAGAACTTTT 
GGTAAATGA 

 

Protein sequence

MNELKHLAVV MDGNRRWARK NGLLEKIGYT QGAKVVEKII EVCVDEKIQN LTLYAFSTEN 
WQRPKEEVEF LFKLLNKYLD ESLNKFITNE VRFKAIGNLS LLDELTLKKI QNFQEQTKNY 
TKLCVNLAIS YGGKDEIVRA VKKVLEKSLE INEENIQANL DLSEDVDLFL RVGSAKRISN 
FLIWQTSYAE IYFSQTLFPA LTKKEITNII TDFKKRKRTF GK