Gene Cla_0935 details

Gene Information

• Locus tag: Cla_0935
• Symbol: dnaK
• ID: 7410515
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Campylobacter lari RM2100
• Kingdom: Bacteria
• Replicon accession: NC_012039
• Strand: -
• Start bp: 896177
• End bp: 898045
• Gene Length: 1869 bp
• Protein Length: 622 aa
• Translation table: 11
• GC content: 33%
• IMG OID: 643718063
• Product: molecular chaperone DnaK
• Protein accession: YP_002575510
• Protein GI: 222823936
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0443] Molecular chaperone
• TIGRFAM ID: [TIGR02350] chaperone protein DnaK

Plasmid Coverage information

• Num covering plasmid clones: 32
• Plasmid unclonability p-value: 0.550928
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGTAAAG TTATAGGTAT AGATTTAGGA ACAACAAATT CTTGTGTAAG TGTGTATGAA 
AGAGGTGAGA GTAAGGTTAT ACCAAATAAA GAAGGTAAAA ACACCACCCC TTCTGTGGTA 
GCTTTTACTG ATAAAGGTGA AATTTTAGTT GGAGATAGTG CTAAACGCCA AGCAGTAACA 
AACCCTGAAA AAACCATTTA TTCTATAAAA AGAATTATGG GTTTGATGAT CAATGAAGAT 
GCAGCAAAAG AAGCTAAAAA TCGTCTTCCT TATCATATAA CAGAAAGAAA TGGAGCTTGT 
GCTATAGAAA TAGCTGGAAA AATTTATACT CCACAAGAAA TTTCAGCAAA AGTTTTGATG 
AAATTAAAAG AAGATGCTGA AGCTTTTTTA GGTGAAAAAG TTGAAGATGC GGTTATAACC 
GTTCCTGCAT ATTTTAATGA TGCGCAAAGA AAAGCTACAA AAGAAGCTGG AACCATAGCA 
GGATTAAATG TTTTAAGAAT TATAAATGAA CCAACAGCAG CGGCTTTAGC TTATGGGCTT 
GATAAAAAAG AAAGTGAAAA AATCGTAGTT TATGATTTAG GTGGTGGTAC ATTTGATGTT 
ACTGTTCTTG AAACTGGCGA TAATGTAGTA GAAGTTTTAG CAACAGGTGG TAATGCATTT 
TTAGGTGGCG ATGATTTTGA TAATAAATTA ATAGATTATT TAGCAAGTGA ATTTAAAGAT 
GAAACTGGAA TTGATCTTAA AAATGATGTT ATGGCTTTAC AAAGATTAAA AGAAGCGGCT 
GAAAATGCTA AAAAAGAACT CAGTTCAGCA AATGAAACTA ATGTAAATTT ACCATTTATT 
ACAGCTGATG CAAGTGGTCC AAAGCACTTA ACAAAAACTA TCACAAGAGC AAAATTTGAA 
AGCATGATTG ATGGTTTGGT GGCTGAGACT ATTAGCAAAA TCAATGAAGT CGTAAAAGAT 
GCAGGGCTTG ATAAGAGTGA AGTAAAAGAA ATTGTAATGG TGGGTGGATC TACCCGTGTT 
CCTTTGGTTC AAGAAGAAGT TAAAAAAGCT TTTGGAAAAG ATTTAAATAA ATCAGTAAAT 
CCTGATGAAG TTGTTGCAAT TGGTGCAGCG ATTCAAGGAG CGGTTATAAA AGGTGATGTT 
AAAGATGTAT TGTTGCTTGA TGTTACTCCG CTTTCTTTGG GTATTGAAAC TTTAGGTGGA 
GTGATGACTA AAATCATAGA AAAAGGCACA ACTATACCAA CTAAAAAAGA GCAAACTTTC 
TCAACTGCGG AAGATAATCA AAGTGCAGTT ACTATCAATG TTTTACAAGG TGAGAGAGAA 
TTTAGCCGCG ATAATAAATC TTTAGGAAAT TTCAATCTTG AAGGAATTCC ACCAGCACCT 
CGTGGTATGC CACAAATTGA AGTAACATTT GATATAGATG CAAATGGTAT TTTAACAGTT 
AGTGCTAAAG ATAAAGCTAC AGGTAAAGCT CAAGAGATTA AAATCACAGG TTCAAGTGGT 
TTAAGCGAAG AAGAAATTAA CAATATGGTT AAAGATGCAG AATTGCACAA AGAAGAAGAT 
AGAAAACGCA AAGAAGCAGT AGAAGCAAGA AATTCTGCAG ATAGTTTAGT ACATCAAGTA 
GAAAAATCTT TAAGCGAGCT TGGAGAAAAA GTAAGTGATG AGGATAAAGC AAATATTCAA 
AAAGCATTAG ATGATTTAAA AGAAACTTTA AAAAATGCAA ATGCTTCTAA AGAAGAAATT 
GAAAGCAAAA TGAAAACATT AAGCGAGGTT TCTCATAAAT TAGCTGAAAA TATGTATAAA 
AAAGATGAAA AACCAAGTGA TGATAAAAAG AAAAAAGATG ATGATGTAAT TGATGCTGAA 
GTAGAATAA 

 

Protein sequence

MSKVIGIDLG TTNSCVSVYE RGESKVIPNK EGKNTTPSVV AFTDKGEILV GDSAKRQAVT 
NPEKTIYSIK RIMGLMINED AAKEAKNRLP YHITERNGAC AIEIAGKIYT PQEISAKVLM 
KLKEDAEAFL GEKVEDAVIT VPAYFNDAQR KATKEAGTIA GLNVLRIINE PTAAALAYGL 
DKKESEKIVV YDLGGGTFDV TVLETGDNVV EVLATGGNAF LGGDDFDNKL IDYLASEFKD 
ETGIDLKNDV MALQRLKEAA ENAKKELSSA NETNVNLPFI TADASGPKHL TKTITRAKFE 
SMIDGLVAET ISKINEVVKD AGLDKSEVKE IVMVGGSTRV PLVQEEVKKA FGKDLNKSVN 
PDEVVAIGAA IQGAVIKGDV KDVLLLDVTP LSLGIETLGG VMTKIIEKGT TIPTKKEQTF 
STAEDNQSAV TINVLQGERE FSRDNKSLGN FNLEGIPPAP RGMPQIEVTF DIDANGILTV 
SAKDKATGKA QEIKITGSSG LSEEEINNMV KDAELHKEED RKRKEAVEAR NSADSLVHQV 
EKSLSELGEK VSDEDKANIQ KALDDLKETL KNANASKEEI ESKMKTLSEV SHKLAENMYK 
KDEKPSDDKK KKDDDVIDAE VE