Gene Cla_0661 details

Gene Information

• Locus tag: Cla_0661
• Symbol: pbpC
• ID: 7409995
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Campylobacter lari RM2100
• Kingdom: Bacteria
• Replicon accession: NC_012039
• Strand: +
• Start bp: 634381
• End bp: 636207
• Gene Length: 1827 bp
• Protein Length: 608 aa
• Translation table: 11
• GC content: 33%
• IMG OID: 643717792
• Product: penicillin-binding protein 2
• Protein accession: YP_002575241
• Protein GI: 222823667
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG0768] Cell division protein FtsI/penicillin-binding protein 2
• TIGRFAM ID: [TIGR03423] penicillin-binding protein 2

Plasmid Coverage information

• Num covering plasmid clones: 32
• Plasmid unclonability p-value: 0.5709
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCGTATGC GTTTGGTGAT GGGCTTTATA GCTTGTTTTT TCTTGCTTTT GCTTGCTAGA 
GTGTATTATA TAAGTATTAA ATCTAATGTT TATTATGAAG AAATAGCTAA ACAAAATGCC 
ATTAAAACGC AATTTTTAGC ACCTGTTAGA GGGCAAATTT TAGACATAAA GGGTAGACCC 
TTAGCGGTAA ATAAATTAGG TTTTTCGATC TCTATAAAGC CATATTTGCA TATAAAAAAG 
AAAAACAGAG CTCTTTTAGA GCAAGAATTA CAAGCTATAG CAGGAGCCTT TCCGGATTTA 
AATGTTACTA AGCTCAAAAG AGCTTATGTA AAAGCGGATT CTTATTATAA CCAAGATTAT 
ATAGAAGTGG TTCCATTTAT AGAATATGAC GCGATGATTA AGCATTTTAC TAAGCTTAAT 
TTGCGTGAAA ATATGCAAGT TAAATCTACT ACTCAAAGAT TTTATCCTTA TGATGCTTTA 
GCTAGCCATG TTATAGGTTA TGTTGGAAAA GCAAATTTAA ATGATATGAA TGAAAATGAA 
ATTGCAAGAT TGACTAGCTA CGTAGGGCGT AGTGGCATAG AGCGTTCTTA TAATGAAATT 
TTACAAGGCC AAAAGGGCGA AAAGGTTAGC AAGGTAAATG CATTAAATAA AGAAATAGAA 
GAACTTTCTT ATAAAAAGCC TACTTCAAGT AATATCACTT TAAGTATAGA TCTTGACTTG 
CAAGAATATT TGGCCAGTAT TTTTGAAAAT TTAGCAGGTG CAGCTATAGT AATGGATGTA 
AAAAATGGGG CTATTTTAGC AGCGGGTAGT TTTCCTGAGT ATAATCTCAA TCCTTTTGTT 
ACGGGTATTA GCCAAGAAGA ATGGGATAAA CTTTCTAATG ATTTAAACCA TCCTTTTACT 
AATAAACTCA TTAATGGACT TTATCCTCCA GGTTCGGTTG TAAAAATGGG TACAGCTTTG 
GCGTTTTTAG ATGGTGGAAA GGTAGGTGAA AATCATAAAT ACTTGTGTGA TTCTAACTTT 
GAGCTTGGTG GTAGAAAATT TAGATGTTGG AAGGCTATAG GTCATGGTTA TGTAAATATG 
ATTGATGCTA TTAGAGAAAG CTGTGATGTG TATTTTTATA AAGGCGCTTT GGAAGTTGGC 
ATTGACATCA TTAGTTCTGT TTTTGAAAGA ATAGGTTTTG GCGCAAAAAC AGGAGTTGAT 
TTACCTAATG AATTTATAGG AACAGTTCCT AATAGAATAT GGAAAAAAGA AAAATACAAC 
CAACCATGGT ATCAAGGTGA AACTTTAAAT ACAAGCATAG GTCAAGGTGA TTTTCTTGCT 
ACTCCTATGC AAGTGGCTAA ATTTACAGCT ATGATTGCTA CAGCTAAAAA TATCACACCA 
CATTTTTTAC ATAGCGTTGA TGATAATGTT ACTAAGGTAA ATTTTGACAA TAATAAAAGT 
GTTTTTACAA CTTTTGAACT ATCAAAACTT CCACTTTTAA GGCGCGCTAT GTATGAAGTT 
GCTAATGAAG ATGGTGGGAC TACGGCAAGA TTTTTAAGAA ATTCACCTAT TACCATAGCA 
GCTAAGACAG GAACAGCTCA AGTAGTTGGA ATTTCTCAAA GTGAAAAAAA ACGTATTAAA 
GAAGAGGATT TGGAGTATTT TTTAAGATCT CATGCTTGGA TTACTTCTTA TGCACCTTAT 
GAAAAACCAC AATATGTAGT AGTGGTTTTA ATCGAACATG GAAAAAGCGG TAGTAGCACA 
GGAGGACCTA TACTGGCTAA AATTTATCAA AAACTTATAG ATTTGGGTTA TATTGATAAA 
AAATATATCA AGAAAAAGAC TAGATAA 

 

Protein sequence

MRMRLVMGFI ACFFLLLLAR VYYISIKSNV YYEEIAKQNA IKTQFLAPVR GQILDIKGRP 
LAVNKLGFSI SIKPYLHIKK KNRALLEQEL QAIAGAFPDL NVTKLKRAYV KADSYYNQDY 
IEVVPFIEYD AMIKHFTKLN LRENMQVKST TQRFYPYDAL ASHVIGYVGK ANLNDMNENE 
IARLTSYVGR SGIERSYNEI LQGQKGEKVS KVNALNKEIE ELSYKKPTSS NITLSIDLDL 
QEYLASIFEN LAGAAIVMDV KNGAILAAGS FPEYNLNPFV TGISQEEWDK LSNDLNHPFT 
NKLINGLYPP GSVVKMGTAL AFLDGGKVGE NHKYLCDSNF ELGGRKFRCW KAIGHGYVNM 
IDAIRESCDV YFYKGALEVG IDIISSVFER IGFGAKTGVD LPNEFIGTVP NRIWKKEKYN 
QPWYQGETLN TSIGQGDFLA TPMQVAKFTA MIATAKNITP HFLHSVDDNV TKVNFDNNKS 
VFTTFELSKL PLLRRAMYEV ANEDGGTTAR FLRNSPITIA AKTGTAQVVG ISQSEKKRIK 
EEDLEYFLRS HAWITSYAPY EKPQYVVVVL IEHGKSGSST GGPILAKIYQ KLIDLGYIDK 
KYIKKKTR