| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cla_0488 |
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| Symbol | lysS |
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| ID | 7411225 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Campylobacter lari RM2100 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012039 |
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| Strand | + |
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| Start bp | 463376 |
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| End bp | 464878 |
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| Gene Length | 1503 bp |
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| Protein Length | 500 aa |
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| Translation table | 11 |
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| GC content | 30% |
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| IMG OID | 643717619 |
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| Product | lysyl-tRNA synthetase |
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| Protein accession | YP_002575087 |
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| Protein GI | 222823513 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1190] Lysyl-tRNA synthetase (class II) |
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| TIGRFAM ID | [TIGR00462] lysyl-tRNA synthetase-like protein GenX
[TIGR00499] lysyl-tRNA synthetase, eukaryotic and non-spirochete bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 53 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTGATA ATATTTTAGA GCAACAAAAA ATTCAAAAAG CGCAAGAGTT AAAAGAATTA
GGAATCAACC CTTATCCGCA CTTTTTAAAA AAAGAAATGA GTATAAGTGA ATATAAGGCT
AAATTTACCT ATATTAAAGA TATGGAAAAT CAGCGCGATG AAAATGCTCA TGGAGTATTA
GCAGGAAGAT TAAAGCTTCT TAGGATAGCT GGTAAATCAG TATTTGCTAA TATAGAAGAT
GAGCAAGACA ATTTACAAAT TTATTTTAAT CAAAATATCT TAGGAGAAGA ATACTTTGCC
ATTTTAAAAA AATATCTTGA AGTAGGGGAT ATTGTTTTGG TTAAAGGTTT TCCTTTTATG
ACAAAAACAG GAGAATTCAG TCTTCATGTA GAGCAAATTC AAATAGCTAC AAAAGCTATA
GTGCCTTTAC CAGAAAAATA TCATGGGCTG ACAGATATTG AGCAAAGATA TAGAAAAAGA
TATCTTGATA TGATTATGAA TAGTGAGGTG AGAAAAGATT TTATTTTGCG CTCTAAAATC
GTTTCTTATA TTAGATCTTT TTTTGATAAT AAAGGATTTT TGGAAGTTGA AACACCAATG
ATGCATCCTA TTGCAGGAGG AGCAAATGCA AAACCTTTTG TGACTTATCA CAATGCTTTG
GGTGTGGAAA GATTCTTAAG AATTGCTCCA GAATTATATC TAAAACGTTT GATTGTAGGT
GGTTTTGAAG CGGTTTATGA GATTAATAGA TGTTTTAGAA ATGAAGGGAT GGATTTAACG
CACAATCCTG AATTTACTAC AATTGAGTTT TATTGGGCTT ATCATAATTA TCATGATTTA
ATGGATTTAA CAGAAGAGCT TTTTGCTATG CTTTTAGATA AGTTAAATTT AGATAAAAAA
CTTGAATTTG ATGAAAAAAT AATTGATTTT TCTAAGTCAT TTGAAAGAAT TACTTATAAA
GACGCATTAA AAAAATACGG TGGTTTGGAT GATGAGCTTA TTAACAATAA AGAATTAATC
TTGAAAAAGC TAAAAAAAGA TGGATTTGAA GCCAATGAAA AATTGGAATT AGGCCATTTG
CAAGCTGAAC TTTTTGATAA TTATGTTGAA GATAAATTGA TTAATCCTAC TTTTGTGATA
GATTTTCCTA TTTCTATAAG TCCTTTATCT AGAAGAAGTG ATAAAGATGC AGATATTGCT
GAAAGATTTG AGTTGTTTAT CGCAGGCAGA GAAATTGCTA ATGGATTTAA CGAGCTTAAT
GATCCACTAG ATCAATATGA GAGATTTTTA AAGCAAATTG AAGCAAAAAA TGCAGGTGAT
GAAGAAGCAT GTGAAATGGA TGAGGATTTT GTTAATGCAT TAGGTTATGC TATGGCACCA
ACTGCAGGAC AAGGCATAGG AATAGATAGA TTAGTCATGC TTTTAATTAA TAAAAAATCA
ATTCGTGATG TAGTACTTTT CCCAGCTATG AGACCACTTA AAAATGAGAT AAAAGGAGAG
TAA
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| Protein sequence | MFDNILEQQK IQKAQELKEL GINPYPHFLK KEMSISEYKA KFTYIKDMEN QRDENAHGVL
AGRLKLLRIA GKSVFANIED EQDNLQIYFN QNILGEEYFA ILKKYLEVGD IVLVKGFPFM
TKTGEFSLHV EQIQIATKAI VPLPEKYHGL TDIEQRYRKR YLDMIMNSEV RKDFILRSKI
VSYIRSFFDN KGFLEVETPM MHPIAGGANA KPFVTYHNAL GVERFLRIAP ELYLKRLIVG
GFEAVYEINR CFRNEGMDLT HNPEFTTIEF YWAYHNYHDL MDLTEELFAM LLDKLNLDKK
LEFDEKIIDF SKSFERITYK DALKKYGGLD DELINNKELI LKKLKKDGFE ANEKLELGHL
QAELFDNYVE DKLINPTFVI DFPISISPLS RRSDKDADIA ERFELFIAGR EIANGFNELN
DPLDQYERFL KQIEAKNAGD EEACEMDEDF VNALGYAMAP TAGQGIGIDR LVMLLINKKS
IRDVVLFPAM RPLKNEIKGE
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