Gene Cla_0486 details

Gene Information

• Locus tag: Cla_0486
• ID: 7411223
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Campylobacter lari RM2100
• Kingdom: Bacteria
• Replicon accession: NC_012039
• Strand: +
• Start bp: 462351
• End bp: 462920
• Gene Length: 570 bp
• Protein Length: 189 aa
• Translation table: 11
• GC content: 27%
• IMG OID: 643717617
• Product: conserved hypothetical integral membrane protein, CvpA family
• Protein accession: YP_002575085
• Protein GI: 222823511
• COG category: [R] General function prediction only
• COG ID: [COG1286] Uncharacterized membrane protein, required for colicin V production

Plasmid Coverage information

• Num covering plasmid clones: 61
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAAAATT TTTCGTGGTT TGATGTATTT GTTTTGGGCT TAACTGTGAT TTTAGGCTTG 
AAAGGCTTGG TAAGTGGTTT ATTTAAAGAA ATTTTTGGCT TGTTAGGTAT AGTCGGTGGG 
GTTTTACTTG CTTCAAGATA TGCTAAAGAA GTAGCAGAGA TTATTAATAA TAATTTTTAT 
GCAATTGAAA ATGAAAATCT TGCAATTTTT GTGGGATTTT TAGTTTTATT GATCGTGATA 
TGGATAGCTT GTATGGCTTT GGGAAATATA TTATCAAAGA TTTTTAGTAT GAGTGGTCTT 
GGTTTTATAG ATCGTATAGG TGGATTTTTA TTTGGTAGTG CTAAAATATT TTTGATTTTT 
GCAATTTTAG TGGCTTGTAT TAATAATATA GATTTTTTGA ATTCAAGTTT AGAAAAATAT 
GCTAAAAATA GCTATACATT AGATCTACTT AGACAAACAG GTGATTTTAT AATGAATACT 
GATTTTACTC AAAATGGTTT AGATAAAATA CAAGAACAAA TTATAGATTC TAATTTAAGT 
CTAAATTCGG AGGTAAATAA TGCAAATTGA 

 

Protein sequence

MENFSWFDVF VLGLTVILGL KGLVSGLFKE IFGLLGIVGG VLLASRYAKE VAEIINNNFY 
AIENENLAIF VGFLVLLIVI WIACMALGNI LSKIFSMSGL GFIDRIGGFL FGSAKIFLIF 
AILVACINNI DFLNSSLEKY AKNSYTLDLL RQTGDFIMNT DFTQNGLDKI QEQIIDSNLS 
LNSEVNNAN