Gene Cla_0478 details

Gene Information

• Locus tag: Cla_0478
• Symbol: gmhA
• ID: 7411215
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Campylobacter lari RM2100
• Kingdom: Bacteria
• Replicon accession: NC_012039
• Strand: +
• Start bp: 455925
• End bp: 456485
• Gene Length: 561 bp
• Protein Length: 186 aa
• Translation table: 11
• GC content: 33%
• IMG OID: 643717609
• Product: phosphoheptose isomerase
• Protein accession: YP_002575077
• Protein GI: 222823503
• COG category: [G] Carbohydrate transport and metabolism
• COG ID: [COG0279] Phosphoheptose isomerase
• TIGRFAM ID: [TIGR00441] phosphoheptose isomerase

Plasmid Coverage information

• Num covering plasmid clones: 59
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATAAATA AAATTGAAAA GGAATTTATT CAACATCAAA AAACCTTGGA GCAAAGTTTA 
AAATTAAAAG AGCAAATTGC TATGGTTGCT CAAGAGTTAA AAGTGTGCTT GGAAAATGGT 
GGGAAAATTT TAATTTGCGG AAATGGTGGG AGTGCTGCAG ATAGTCAGCA TTTTGCTGCT 
GAGCTTAGTG GAAGATATAA AAAAGAAAGA AAAGCTTTAG CTGCTATAGC TCTTAGTACA 
GATACTTCTG CTTTAAGCGC TATAGGAAAT GATTATGGTT TTGAATTTGT TTTTTCAAGA 
CAAGTTGAAG CTTTAGCTAG TGATAATGAT GTGTTGATTG GAATTTCTAC TAGTGGAAAA 
AGCCCAAATG TAATCAAAGC TTTTGAAAAG GCTAAAGAAA TTGGTGCTAA GTGTATAGGT 
TTGAGTGGGA AGGGCGGCGG AGTGATGAAT GCATTATGTG AGCATAATAT AGTCATTCCA 
AGTGATGATA CAGCTAGAAT TCAAGAAATG CATATTTTAA TTATACATTG TTTGTGTGAT 
TTGATAGAAG AAGAATATTA A 

 

Protein sequence

MINKIEKEFI QHQKTLEQSL KLKEQIAMVA QELKVCLENG GKILICGNGG SAADSQHFAA 
ELSGRYKKER KALAAIALST DTSALSAIGN DYGFEFVFSR QVEALASDND VLIGISTSGK 
SPNVIKAFEK AKEIGAKCIG LSGKGGGVMN ALCEHNIVIP SDDTARIQEM HILIIHCLCD 
LIEEEY