| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cla_0471 |
|---|
| Symbol | rho |
|---|
| ID | 7411208 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Campylobacter lari RM2100 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012039 |
|---|
| Strand | - |
|---|
| Start bp | 448628 |
|---|
| End bp | 449932 |
|---|
| Gene Length | 1305 bp |
|---|
| Protein Length | 434 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 32% |
|---|
| IMG OID | 643717602 |
|---|
| Product | transcription termination factor Rho |
|---|
| Protein accession | YP_002575070 |
|---|
| Protein GI | 222823496 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1158] Transcription termination factor |
|---|
| TIGRFAM ID | [TIGR00767] transcription termination factor Rho |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 41 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAAAATA CAAAAGAAAA AAAACAACAT CAAAGAACAC ACATTCCAGT GGAAGGTTAT
AAAATAGAAG ATTTAAAGTT GCTTGATCTA GAAAGCTTAG TTAAAATTGC CAATGAAGCA
GAAATAGAAA ATCCAAGAGA ATTTAGAAGA CAAGATCTTA TTTTTGAAAT TCTAAAAGCC
CAAACCAAAA AAGGTGGTTT TATACTTTTT ACAGGAATTT TAGAAATTTC ACCTGAGGGT
TATGGCTTTT TACGCGGAAT GGATTCAAAT TTAAGCGATA GTGTAAATGA TGCTTATGTA
TCAAACTCAC AAATTCGTAA ATTCGCTCTT CGCGTGGGAG ATATAGTTAC CGGTCAAGTT
AGAGAGCCAA AAGACCAAGA AAAATACTAT GCTTTGTTAA AAATAGAAGC GATTAATTAT
CTTCCTCTTA AAGAAGCTAG AGAAAGACCT TTATTTGACA ATCTTACTCC AATTTTTCCA
ACACAAAAAT TAAAATTAGA ATATGATCCT TTAAAACTAA CAGGTAGAAT GCTTGACTTA
TTTGCCCCTA TAGGAAAAGG CCAAAGAAGC TTAATCGTAG CACCTCCTAG AACTGGTAAA
ACAGAATTAA TGAAAGAATT AGCAACTGCA ATTGCCAAAA ACCACCCTGA AGCTCATTTG
ATAGTACTTT TAGTAGATGA GCGTCCAGAA GAAGTTACAG ATATGCAAAG ATGTGTAAAA
GGTGAAGTTT TTAGCTCTAC TTTTGATTTA CCAGCTTACA ATCATGTAAG AGTAGCTGAA
CTTGTTATAG AAAAAGCAAA AAGGATGGTA GAAACTGGTA AAGATGTTGT AATATTGCTT
GATAGTATTA CAAGATTAGC AAGAGCTTAT AATACTGCTA CACCAAGTAG TGGTAAGGTT
TTAAGCGGTG GGGTTGATGC AAATGCATTG CATAAACCAA AACGCTTCTT TGGAGCAGCA
AGAAATATAG AAAATGGTGG TTCATTAACC ATAATAGCAA CAGCGCTCAT TGAAACTGGC
TCAAGAATGG ATGAAGTGAT TTTTGAAGAA TTCAAAGGTA CAGGAAATAG TGAAATCGTT
CTTGATAGAA ATATTTCAGA TAGAAGAATT TACCCTGCAA TTAATATCAT AAAATCAGGC
ACTAGAAAAG AAGAATTACT ACAAGGTGTT GAAAAATTAC AAAAAATTTG GGCTATTAGA
TCAGCTATTT CACAAATGGA TGATATAGAA GCTTTAAAAT TCTTATACTC TAAAATGCTA
AAAACCAAAA GTAACGAAGA ATTATTATCT ATAATGAATG AGTAA
|
|---|
| Protein sequence | MENTKEKKQH QRTHIPVEGY KIEDLKLLDL ESLVKIANEA EIENPREFRR QDLIFEILKA
QTKKGGFILF TGILEISPEG YGFLRGMDSN LSDSVNDAYV SNSQIRKFAL RVGDIVTGQV
REPKDQEKYY ALLKIEAINY LPLKEARERP LFDNLTPIFP TQKLKLEYDP LKLTGRMLDL
FAPIGKGQRS LIVAPPRTGK TELMKELATA IAKNHPEAHL IVLLVDERPE EVTDMQRCVK
GEVFSSTFDL PAYNHVRVAE LVIEKAKRMV ETGKDVVILL DSITRLARAY NTATPSSGKV
LSGGVDANAL HKPKRFFGAA RNIENGGSLT IIATALIETG SRMDEVIFEE FKGTGNSEIV
LDRNISDRRI YPAINIIKSG TRKEELLQGV EKLQKIWAIR SAISQMDDIE ALKFLYSKML
KTKSNEELLS IMNE
|
|---|
| |