| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cla_0406 |
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| Symbol | truD |
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| ID | 7411049 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Campylobacter lari RM2100 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012039 |
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| Strand | + |
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| Start bp | 380752 |
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| End bp | 381879 |
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| Gene Length | 1128 bp |
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| Protein Length | 375 aa |
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| Translation table | 11 |
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| GC content | 26% |
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| IMG OID | 643717537 |
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| Product | tRNA pseudouridine synthase D |
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| Protein accession | YP_002575015 |
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| Protein GI | 222823441 |
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| COG category | [S] Function unknown |
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| COG ID | [COG0585] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR00094] tRNA pseudouridine synthase, TruD family |
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Plasmid Coverage information |
| Num covering plasmid clones | 46 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAAAGA ACATCATTTT TAAACCACTT TATGCTTTAA AACATAGTCC AATAAATGTG
TATTTTTCAA AAAATAGCAA TGATTTTGTC GTTAGAGAAA AACCTTTGTA TGAATTTAGT
GGCAAGGGGG AGCATTTAAT TTTACATATA CAAAAAAAAG ATCTTAGTAC AAGTGAGGCT
TTGAGAATTT TAAGTGAGCA AAGCGGTGTG AAAATGAGAG ATTTTGGATA TTGTGGATTA
AAAGACAAGC AAGGTTTAAC TACTCAATAC ATCTCAATGC CTAAAAAATT TGAAGAGAAT
TTAAAAAATT TCAAGCATGA AAAAATGAAA ATTTTAGAAA GTTTTGTTCA TGATAATAAG
CTTAGAATAG GGCATTTAAA AGGAAATTCA TTTTTTATAA GATTAAAAAA AGTTTTAAAA
GTAGATGCTT TAAAGATAGA ACAAGCCTTT AAAAATATCC AAGAGCAAGG TTTTGCAAAT
TATTTTGGAT ATCAGCGTTT TGGTAAATTT CAAGATAATT TTTCACAAGG ATTAGAAATT
TTAAAGGGCA AAAATATAAA AAATAAAAAA ATGCAAGAAT TTTTAATCTC TGCTTTTCAA
AGTGAGCTTT TTAATAAATA CTTGAGTAAA AGAGTGGAAA TTTCACATTT TATTAATGAT
TTTAGCGAAA AAGAGATAAG CCAAATTTAT GCTCTTGATA AAGAAGAAAT CAAAAGTTTG
AAAAATCAAA AGCAGTTTTT TAAACTTTTA AAAGGTGAAG TTTTAGGGCA TTATCCTTTT
GGAAAATGTT TTTTGTGTGA AGATTTAATA AATGAAGTAG AAAGATTTAA TCAAAAAGAT
ATTAGTGCTA TGGGACTTTT GCTTGGCGAA AGGGCATATG AGAGTAAAAA TGATACTTTT
GCTAGAAAAA TAGAAGATGA AATTTTTAGT AATTTTTATG AGTATAAAAC TAAAATGCAA
GGCTCAAGAA GATTTTTATG GTCATATATG CAAGATTGTA AATGTTTTTA TGATGAAGAA
AAAGCACATT TTACTTTGGA ATTTTTCTTA CAAAAAGGCT CATATGCCAC AGTGATCTTA
GAAGAAATTT TACATACAGA TATCTTTGAA CAAAACCATA ATATATAA
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| Protein sequence | MEKNIIFKPL YALKHSPINV YFSKNSNDFV VREKPLYEFS GKGEHLILHI QKKDLSTSEA
LRILSEQSGV KMRDFGYCGL KDKQGLTTQY ISMPKKFEEN LKNFKHEKMK ILESFVHDNK
LRIGHLKGNS FFIRLKKVLK VDALKIEQAF KNIQEQGFAN YFGYQRFGKF QDNFSQGLEI
LKGKNIKNKK MQEFLISAFQ SELFNKYLSK RVEISHFIND FSEKEISQIY ALDKEEIKSL
KNQKQFFKLL KGEVLGHYPF GKCFLCEDLI NEVERFNQKD ISAMGLLLGE RAYESKNDTF
ARKIEDEIFS NFYEYKTKMQ GSRRFLWSYM QDCKCFYDEE KAHFTLEFFL QKGSYATVIL
EEILHTDIFE QNHNI
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