Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cla_0326 |
Symbol | miaB |
ID | 7410234 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter lari RM2100 |
Kingdom | Bacteria |
Replicon accession | NC_012039 |
Strand | + |
Start bp | 299396 |
End bp | 300694 |
Gene Length | 1299 bp |
Protein Length | 432 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 643717458 |
Product | (dimethylallyl)adenosine tRNA methylthiotransferase |
Protein accession | YP_002574937 |
Protein GI | 222823363 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0621] 2-methylthioadenine synthetase |
TIGRFAM ID | [TIGR00089] RNA modification enzyme, MiaB family [TIGR01574] tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB |
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Plasmid Coverage information |
Num covering plasmid clones | 54 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAGTAAAA AACTTTTTAT ACAAACTTTA GGTTGTGCTA TGAATGTGAG AGATTCAGAG CACATGATAG CCGAGCTTAA AGAAAAAGAA AATTATGAAT TAACTCAAGA TGCAAAAGAA GCAGATTTGA TTTTAATCAA TACTTGCTCG GTGCGTGAAA AGCCTGTACA TAAGCTTTTT TCAGAAGTTG GAAGTTTTGA AAAAATCAAA AAAAATGGTG CGAAAATAGG AGTTTGTGGT TGCACTGCTT CTCATTTGGG TGATGAAATT TTTAAGCGTG CTCCTAATGT TGATTTTGTT TTGGGAGCTA GAAATGTTTC TAAAATAACA AAGGCAGTAA ATACTCCTAA ATTTTTAGGT AATGATATAG ATTTTGATGA GAGTAATTAT GCTTTTGCTG ATTTTAGAAA TAGTCTTTAT AAAACTTATG TAAATATTTC TATAGGATGT GATAAACATT GCACTTATTG CATAGTGCCA CATACTAGAG GAGATGAGAT TTCTATACCT TTTGAAATTA TCAAAAAAGA AGCGCTAAAA GCAGTTGCTA ATGGTGCTAA AGAGATTTTT TTACTAGGAC AAAATGTTAA CAATTACGGC AAAAGATTTT CTAATGCTCA TGAAAAGATT AATTTTTCAG ATCTTTTAGA AAAATTAAGC GAAATCGAAG GTTTAGAGCG TATCCGCTTT ACAAGCCCAC ATCCATTGCA TATGGATGAT AGATTTTTAG AGGTTTTTTC TAAAAATCCA AAAGTATGTA AGTCTATGCA TATGCCTTTA CAAAGTGGTT CAAGTGAAAT TTTAAAGGCT ATGAAACGCG GTTATACTAA AGAGTGGTAT TTAGATAGGG CCTTAAAACT TCGTTCTATG TGTAAAGATG TGAGTATTTC TACTGATGTG ATTGTGGCTT TTCCAGGTGA GAGTGATAAA GACTTTGAAG ATACCATGGA TGTACTTGAA AAAGTGCGAT TTGAGCAAAT GTTTTCTTTT AAATATTCTA AAAGACCACT AACCAAAGCT GCAACTATGC CAAATCAAAT TCCTGATGAT ATAGCTTCAA AACGCTTGAG TATATTACAA GCTAGACATA CTGAAATTTT AGATGAGATT GTTGCAAAGC AAAAAGATAA AGAATTTGAA GTTTTATTTG AAGAATTAAG AAGCGAAGGC TTTGTAGCAG GTAGAAGCGA TAATAACTTT TTGATTCAAG TTAAAGGAAG CGAAGAATTA TTAGGACAAA TGACAAAAGT AAAAATCACC AATCCTAGGC GTATGGTGTT AAATGGCGAA ATCCTTTAA
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Protein sequence | MSKKLFIQTL GCAMNVRDSE HMIAELKEKE NYELTQDAKE ADLILINTCS VREKPVHKLF SEVGSFEKIK KNGAKIGVCG CTASHLGDEI FKRAPNVDFV LGARNVSKIT KAVNTPKFLG NDIDFDESNY AFADFRNSLY KTYVNISIGC DKHCTYCIVP HTRGDEISIP FEIIKKEALK AVANGAKEIF LLGQNVNNYG KRFSNAHEKI NFSDLLEKLS EIEGLERIRF TSPHPLHMDD RFLEVFSKNP KVCKSMHMPL QSGSSEILKA MKRGYTKEWY LDRALKLRSM CKDVSISTDV IVAFPGESDK DFEDTMDVLE KVRFEQMFSF KYSKRPLTKA ATMPNQIPDD IASKRLSILQ ARHTEILDEI VAKQKDKEFE VLFEELRSEG FVAGRSDNNF LIQVKGSEEL LGQMTKVKIT NPRRMVLNGE IL
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