| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cfla_2316 |
|---|
| Symbol | |
|---|
| ID | 9146217 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cellulomonas flavigena DSM 20109 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014151 |
|---|
| Strand | - |
|---|
| Start bp | 2587334 |
|---|
| End bp | 2588797 |
|---|
| Gene Length | 1464 bp |
|---|
| Protein Length | 487 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | |
|---|
| Product | 3-isopropylmalate dehydratase, large subunit |
|---|
| Protein accession | YP_003637405 |
|---|
| Protein GI | 296130155 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 0.000114053 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGGCA CGCTGGCGGA GAAGGTCTGG GAGGCGCACG TCGTGCGCCG TGGCACGGAC
GGTGCGCCCG ACCTGCTGTA CATCGACCTG CACCTGGTGC ACGAGGTCAC GAGCCCGCAG
GCGTTCGAGG GGCTCCGCCT CGCCGGCCGT CAGGTCCGTC GCCCCGACCT CACGCTCGCG
ACCGAGGACC ACAACACCCC CACGCTCGAC ATCGACCGTC CGATCGCCGA CGCGACGAGC
CGGACGCAGA TCGAGACGCT GCGCAACAAC GCCGCGGAGT TCGGTGTCCG CATCCACTCG
CTGGGCGACG CCGACCAGGG GATCGTCCAC CAGGTCGGGC CCCAGCTCGG GCTCACCCAG
CCCGGCCTGA CGGTCGTCTG CGGCGACTCG CACACCTCGA CGCACGGCGC GTTCGGTGCG
CTCGCGTTCG GCATCGGCAC CAGCGAGGTC GAGCACGTGC TCGCGACCCA GACGCTCCCG
CTGGCGCCGT TCAAGACGAT GGCGATCACC GTCAACGGCC AGCTGCCGAT CGGTGCGAGC
GCCAAGGACA TCATCCTCGC GATCATCGCC AGGATCGGGA CCGGCGGCGG CCAGGGCTAC
GTCCTGGAGT ACCGCGGCGA GGCGATCCGC AACCTCTCGA TGGAGGGGCG GATGACGATC
TGCAACATGT CGATCGAGGC CGGTGCGCGC GCGGGCATGA TCGCCCCCGA CGAGACGACG
TTCGAGTACC TGAAGGGTCG CCCGCACGCG CCCGAGGGTG CCGACTGGGA CGCGGCCGTC
GAGTACTGGC GGACGCTGCG CACCGACGAC GACGCGGTGT TCGACGCCGA GGTCGTCCTC
GAGGCGGCCG ACCTCGAGCC GTTCGTCACG TGGGGCACCA ACCCCGGCCA GGGCCTGCCG
CTGTCGGGCA ACGTGCCGGT GCCGGAGGAG ATCGCCGACG CCAACGAACG CGTCGCCGCC
GAGCGTGCCA TCGAGTACAT GGGCCTGACG CCGGGGCAGC CGCTGCGCGA CATCAAGGTC
GACACGGTCT TCATCGGCTC CTGCACCAAC GGCCGCATCG AGGACCTGCG GGCCGTCGCC
AAGCTCGTCA AGGGCCGCAA GAAGGCCGAC GACGTGCGCG TCCTGGTCGT GCCGGCGTCC
GCGCGCGTGC GCCTGCAGGC CGAGGCCGAG GGCCTGGACC AGATCTTCCT CGACTTCGGC
GCGGAGTGGC GCAACGCCGG CTGCTCGATG TGCCTGGGCA TGAACCCGGA CCAGCTCGCG
CCGCAGGAGC GCTCGGCGTC CACGTCCAAC CGCAACTTCG AGGGCCGCCA GGGCAAGGGC
GGGCGCACGC ACCTCGTGTC GCCGCTCGTC GCCGCCGCGA CGGCCATCCG CGGCACGCTC
TCGTCGGTCG CCGACCTCGG CGCCGACGTG CCCGTCCCCG ACGGCAGCCC GCTCAGCCCC
GACGACGCGC TGCAGACCGT CTGA
|
|---|
| Protein sequence | MAGTLAEKVW EAHVVRRGTD GAPDLLYIDL HLVHEVTSPQ AFEGLRLAGR QVRRPDLTLA
TEDHNTPTLD IDRPIADATS RTQIETLRNN AAEFGVRIHS LGDADQGIVH QVGPQLGLTQ
PGLTVVCGDS HTSTHGAFGA LAFGIGTSEV EHVLATQTLP LAPFKTMAIT VNGQLPIGAS
AKDIILAIIA RIGTGGGQGY VLEYRGEAIR NLSMEGRMTI CNMSIEAGAR AGMIAPDETT
FEYLKGRPHA PEGADWDAAV EYWRTLRTDD DAVFDAEVVL EAADLEPFVT WGTNPGQGLP
LSGNVPVPEE IADANERVAA ERAIEYMGLT PGQPLRDIKV DTVFIGSCTN GRIEDLRAVA
KLVKGRKKAD DVRVLVVPAS ARVRLQAEAE GLDQIFLDFG AEWRNAGCSM CLGMNPDQLA
PQERSASTSN RNFEGRQGKG GRTHLVSPLV AAATAIRGTL SSVADLGADV PVPDGSPLSP
DDALQTV
|
|---|
| |