Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cfla_1994 |
Symbol | |
ID | 9145889 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cellulomonas flavigena DSM 20109 |
Kingdom | Bacteria |
Replicon accession | NC_014151 |
Strand | - |
Start bp | 2220389 |
End bp | 2222239 |
Gene Length | 1851 bp |
Protein Length | 616 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | |
Product | ABC transporter related protein |
Protein accession | YP_003637088 |
Protein GI | 296129838 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0769116 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGCGA GCACGTCGCC GGCCGCGGCC CGCCAGGACA GCCGGATGGC GCCGGCGAGC ACCCTCGGCG TGCTCGCCAC CCTGCGGCGC GCCGCGCAGG TCTCGCCCGA GCTGCTCGAC GGCCTCACGG TCACGCTCGC CCTGGCGGTC GTCGCGGCGA CCGCTCGCGT GCTCGTCCCG CTCGCGGTGC AGCAGACGGT CGACACCGCG ATCCTCGCCC CGGGTGGCGT GGACGTACGC CGTGCGGCGC TGCTCGTCGG GGTCGCCGCG CTCGGCCTGG CGGTGGGTGC GGGATGCTCC GCGCTGGTCA ACGTGCGTCT CTTCCGGTCC AGCGAGGCGG GACTCCTCAC GCTGCGGAGC CGGGCGTTCC GGCACGTGCA CGACCTGTCG GTCCTCACGC AGAACAGCGA GCGCCGCGGC TCGCTGGTCT CGCGCGTCAC CTCGGACGTC GACACGATCT CGATGTTCGT GCAGTGGGGC GGCATCATGC TGCTCGTCTC CGTGCTGCAG ATCCTCGTGG CCACGACGCT GATGGCGGTC TACTCGTGGC AGCTCACGCT GCTCGTGTGG GCGTGCTTCC TGCCGCTCCT GGTCGTGCTG CCACGGCTGC AGCGCGGTGT GAACCGCCGC TACGCGGCCG TGCGCGAGCA GTACGGCGCC ATGCTCGGTG CGGTCTCGGA GGCCGTCGTG GGGGCCGAGA CGATCCGCGC CTACGGTGTG GCGGCACGCA CGCAGCGCCG CATCGACGCC GCCGTCGCCG GCACCCGGCG CGCCATGGTG CGCGCCCAGA ACCTCGTCGC GGTGGTCTTC TCGTCCGGGG TGCTCGTGGC GAACCTCGTG CTCGCCGTCG TCGTCGTCGC CGGCACGTGG CTGGGGGTGG CGGGCGACCT CACGGTCGGT CGGGTGCTGG CGTTCCTCTT CCTCGTGCAG CTCTTCACCG GTCCGGTGCA GATGGCCACC GAGATCCTCA ACGAGCTGCA GAACGCGATC TCCGGCTGGC GCCGCGTGCT CGGCGTCCTC GAGACCCCCG TGGACGTCCC CGAGCCCGGT GACGACGTGG TGCCGAGCCC GCGCGGCCCG GCGGCGCTGA CCTTCACCGG AGTGGGCTAC GCCTACCCCG ACGGCCCGCC GGTGCTGCAG GGCGTCGACC TGCACGTCGC GGCCGGGACG TCGGTCGCCG TGGTGGGGGC GACGGGGTCG GGCAAGACCA CGCTCGCCAA GCTGGTGGCC AGGTTCATGG ACCCGACCGA GGGTGCGGTG CTGCTCGACG GGGTCGATCT GCGGCGGATC GCGTCACGTG ACCTGCGCCG GCGCGTCGTG CTCGTGCCGC AGGAAGGCTT CCTGTTCGAC GGCACCATCG CGGAGAACAT CGCCTACGGG CTGCGGGACG AGGGTGGCGA CCGACCGTCC ACCGAGGGCT CGGCGCCGCA GGATGCCGAG CGCGTCGCGC AGGTCGCGGC CGAGCTCGGG CTCGACGTAT GGCTCGCCGA GCTGCCGAGC GGGCTGGCCA CCCCCGTCGG TCAGCGTGGT GAGCTGCTGT CGGCGGGGGA GCGGCAGCTC GTGGCGCTGG CGCGCGCCCG GCTCGCGGAC GGTGACCTGC TGCTGCTCGA CGAGGCGACC TCCGCGGTGG ACCCGGTGGC CGAGGTGCGG ATCGGTCGGG CGCTGCGCGA GCTCGCACGC GGGCGCACGA CCCTGACGAT CGCGCACCGG CTGTCCACGG CCGAGGCCGC GCACCTCGTG GTCGTCGTGC ACGCGGGCCG CGTCGTCGAG GTCGGCACGC ACGCGGAGCT GACCGCGCGC GACGGGCAGT ACGCGCGGAT GCACGCGGCG TGGGTGGCGC AGACCCGCTG A
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Protein sequence | MSASTSPAAA RQDSRMAPAS TLGVLATLRR AAQVSPELLD GLTVTLALAV VAATARVLVP LAVQQTVDTA ILAPGGVDVR RAALLVGVAA LGLAVGAGCS ALVNVRLFRS SEAGLLTLRS RAFRHVHDLS VLTQNSERRG SLVSRVTSDV DTISMFVQWG GIMLLVSVLQ ILVATTLMAV YSWQLTLLVW ACFLPLLVVL PRLQRGVNRR YAAVREQYGA MLGAVSEAVV GAETIRAYGV AARTQRRIDA AVAGTRRAMV RAQNLVAVVF SSGVLVANLV LAVVVVAGTW LGVAGDLTVG RVLAFLFLVQ LFTGPVQMAT EILNELQNAI SGWRRVLGVL ETPVDVPEPG DDVVPSPRGP AALTFTGVGY AYPDGPPVLQ GVDLHVAAGT SVAVVGATGS GKTTLAKLVA RFMDPTEGAV LLDGVDLRRI ASRDLRRRVV LVPQEGFLFD GTIAENIAYG LRDEGGDRPS TEGSAPQDAE RVAQVAAELG LDVWLAELPS GLATPVGQRG ELLSAGERQL VALARARLAD GDLLLLDEAT SAVDPVAEVR IGRALRELAR GRTTLTIAHR LSTAEAAHLV VVVHAGRVVE VGTHAELTAR DGQYARMHAA WVAQTR
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