| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cfla_1693 |
|---|
| Symbol | |
|---|
| ID | 9145582 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cellulomonas flavigena DSM 20109 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014151 |
|---|
| Strand | - |
|---|
| Start bp | 1882675 |
|---|
| End bp | 1885155 |
|---|
| Gene Length | 2481 bp |
|---|
| Protein Length | 826 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | |
|---|
| Product | DNA topoisomerase (ATP-hydrolyzing) |
|---|
| Protein accession | YP_003636789 |
|---|
| Protein GI | 296129539 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.0385634 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.564105 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGCGTC GCCCCGCGAG CCCCGACCTG CCGCCCGAGG ACCTCGTCGA GCGGATCGTC
GACGTCGACG TCACGACGGA GATGGAGGGG TCGTTCCTCG AGTACGCGTA CTCGGTCATC
TACTCGCGGG CGCTGCCCGA CGCACGTGAC GGGCTCAAGC CCGTGCAGCG CCGGATCATC
TACCAGATGG CCGACATGGG CCTGCGCCCC GATCGCCCGT ACGTGAAGTC GGCGCGCGTC
GTCGGCGAGG TGATGGGCAA GCTGCACCCG CACGGCGACT CGGCGATCTA CGACGCGATG
GTGCGCCTCG CGCAGCCGTT CTCGCTGCGG CTGCCGCTGG TCGACGGGCA CGGCAACTTC
GGCTCGCTCG ACGACGGCCC CGCGGCCTCG CGCTACACCG AGGCGCGCAT GGCTCCCGCG
GCGGTCGCGA TGACGCAGGG TCTCGACGAG GACGTCGTCG ACTTCGTCCC CAACTACGAC
AACAAGCTCC AGCAGCCGGG CGTGCTGCCC GCGGCGATCC CGAACCTGCT GGTCAACGGC
GCGACCGGCA TCGCCGTGGG CATGGCCACC AACATGGCGC CGCACAACCT CGTCGAGGTC
GTCGCGGCTG CGCGGCACCT GGTGGCGCAC CCGGACGCGA CGCTCGAGGA CCTCATGCGG
TTCGTGCCCG GGCCCGACCT GCCGACGGGC GGCAAGATCG TCGGCCTCGA CGGGGTGCGC
GACGCGTACC GCACGGGCCG CGGCGCCTTC CGGACCCGCG CGACGGCGCG GGTGGAGAAC
GTCACGCCGC GCCGCAAGGG CATCGTCGTC ACCGAGCTGC CGTACACGGT CGGCCCGGAG
AAGGTCATCG AGAAGATCAA GGAGGGCGTG CAGTCCAAGA AGCTCTCCGG GATCTCCGAC
GTCGTCGACC TCACCGACCG CCAGCACGGG CTGCGGCTCG TCATCGAGGT CAAGACGGGC
TTCCACCCGG AGGCCGTGCT CGAGCAGCTG TACCGGCACA CGCCGCTCGA GGACTCGTTC
TCCGTGAACA ACGTCGCGCT CGTCGACGGT CAGCCCCGCA CGCTCGGTCT GGTCGACCTG
CTGCGCGTGT GGGTGGACCA CCGCCTCGAG GTGGTGCGCC GCCGCACGTC GTACCGCCTG
ACGAAGCGGC AGGAGCGCCT GCACCTCGTC GAGGGCCTGC TGATCGCGAT CCTCGACATC
GATGAGGTCA TCCAGGTCAT CCGCACGTCC GACGACGCCG ACACCGCTCG GGGGCGTCTG
CGGTCCGTGT TCGACCTCTC GGAGCCGCAG GCGGAGTACA TCCTCGAGCT GCGGCTGCGC
CGCCTCACCC GGTTCTCGCG CATCGAGCTC GAGCGCGAGC GCGACGAGCT GACCGACGAG
ATCGCGCGCC TGCAGGCCAT CCTCGCGGAC GACGGGCTGC TGCGGACGGT CACGTCCGAC
GAGATGGCCG AGGTCGCGGC GACGTACGGC ACCCCGCGGC GCACGGTGCT GCTGGAGCAC
GCGGGCGGTG CGGGCCTGGC CGGCGCGGCC GGCGCGCCGA CGTCCTCGAA GGGCGCCGCC
GCTCCCCTGG AGATCCCCGA CACACCGTGC TGGGCGCTCC TGTCAGCGAC CGGGCTGCTC
GCGCGCACCG GTGAGGACGT CGAGCCCGTG CGCGGCGACG GCACGGTCCG CAGCCGGCAC
GACGTGGTCG CGTCCGCGGT GTCGACGACC GCGCGCGCCG ACATCGGCGC GCTGACCTCG
GCCGGGCGCG TCGTGCGGCT GTCGGTCCTC GAGCTGCCCT CGCTGCCGCC GACGGACGGC
CCACCGTCAC TGTCCGGCGG ACTGCCGGTG GGCGAGGCGG TGACCCTGGA GAAGGGCGAG
AGCGTCGTGG CGCTCGTCCC GTTGGGGGAC GACGCTCCCC CGCTGGCGCT CGGGACCGCG
CAGGGTGTCG TCAAGCGCGT CGCGGCCGGG GACGTGCCGG CCAACCGCGA CGCGTGGGAG
GCGATCAGCC TCAAGGACGG CGACCAGGTC GTCGGTGCGG CGCTCGCGCG TGACGAGGAC
GAGCTGGTGC TCGTGTCGTC GGACTCCTCG CTCCTCCACT TCCCCGGCGC GCAGGTGCGG
CCGCAGGGGC GGTCCGCGGG CGGCATGGCC GGCATCAAGC TGGCCGCCGG TGCGCGCGTC
GTCGCGTTCG GGGTGGTGCG CGCGGGCGAG GACGCGGTCG TCGTGACGGT CTCCGGCTCG
TCGTCGGCGC TGCCGGGCAC CCAGACGGGC GCCGCGAAGG TCACGCCCTT CAGCGCGTAC
CCCGGCAAGG GCCGCGCGAC GGGCGGCGTG CGCTCGCACC GGTTCCTCAA GGGCGAGGAC
GCGCTGATCC TGGCCCACGT GGGCGCGTCC CCGGCGCGCG CGACGGGGGC GGGCGGTCAG
CCGGTCGAGC TGCCGCAGGT CGACGAGCGG CGCGACGGGT CGGGCGTGCC GCTCGGAGCA
CCGGTGCACG CGATCGGCTG A
|
|---|
| Protein sequence | MARRPASPDL PPEDLVERIV DVDVTTEMEG SFLEYAYSVI YSRALPDARD GLKPVQRRII
YQMADMGLRP DRPYVKSARV VGEVMGKLHP HGDSAIYDAM VRLAQPFSLR LPLVDGHGNF
GSLDDGPAAS RYTEARMAPA AVAMTQGLDE DVVDFVPNYD NKLQQPGVLP AAIPNLLVNG
ATGIAVGMAT NMAPHNLVEV VAAARHLVAH PDATLEDLMR FVPGPDLPTG GKIVGLDGVR
DAYRTGRGAF RTRATARVEN VTPRRKGIVV TELPYTVGPE KVIEKIKEGV QSKKLSGISD
VVDLTDRQHG LRLVIEVKTG FHPEAVLEQL YRHTPLEDSF SVNNVALVDG QPRTLGLVDL
LRVWVDHRLE VVRRRTSYRL TKRQERLHLV EGLLIAILDI DEVIQVIRTS DDADTARGRL
RSVFDLSEPQ AEYILELRLR RLTRFSRIEL ERERDELTDE IARLQAILAD DGLLRTVTSD
EMAEVAATYG TPRRTVLLEH AGGAGLAGAA GAPTSSKGAA APLEIPDTPC WALLSATGLL
ARTGEDVEPV RGDGTVRSRH DVVASAVSTT ARADIGALTS AGRVVRLSVL ELPSLPPTDG
PPSLSGGLPV GEAVTLEKGE SVVALVPLGD DAPPLALGTA QGVVKRVAAG DVPANRDAWE
AISLKDGDQV VGAALARDED ELVLVSSDSS LLHFPGAQVR PQGRSAGGMA GIKLAAGARV
VAFGVVRAGE DAVVVTVSGS SSALPGTQTG AAKVTPFSAY PGKGRATGGV RSHRFLKGED
ALILAHVGAS PARATGAGGQ PVELPQVDER RDGSGVPLGA PVHAIG
|
|---|
| |