Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cfla_1340 |
Symbol | |
ID | 9145222 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cellulomonas flavigena DSM 20109 |
Kingdom | Bacteria |
Replicon accession | NC_014151 |
Strand | - |
Start bp | 1486662 |
End bp | 1487399 |
Gene Length | 738 bp |
Protein Length | 245 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_003636437 |
Protein GI | 296129187 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.189821 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.000819014 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCCGTCCG GTCCGGTCCT CGCGGCCGCC GCCAACCCGT GGTTCTCGTG GGACTACCTC GAGCGCAACG GGTCCGACGT GCTGCGGTAC ACGCAGCAGC ACGCGTCGCT GACGGTGCAG GCCGTGCTGA TCGCGCTCGT GGTCGCCCTG CCGCTCGCGG CGCTCGCGCA CGCGCGTCCG CGCCTGGCCG CGCCGGTCCT GGCGACCACC GGCGTGCTCT ACACGGTCCC GTCGCTGGCC CTGTTCGCGG TCCTCGCGCC CGTGACGGGC ATCGGGCGGA CCACCGTGCT CGTGGGCCTC GTGGTGTATG CGCTCCTCGT GCTCGTCCGC AACGTGCTCG TGGGGCTGCA GTCGGTGGAC CCCGCGGTGC GCGACGCCGC ACGCGGCATG GGCTACGGAC GCTGGCGCCT GCTGCTGGGC GTCGAGCTGC CGCAGGCGGT GCCGGCCGTC GTCACCGGGA TGCGCCTGGC GACCGTGAGC ACCGTGGCAC TGGTGACGGT CGGTGTGGTG GTCGGGTACG GCGGGCTGGG GCAGCTGATG TTCCGCGGCT TCCGCAGCAA CTACCACGCG GAGGTCATGA CGGCCACCGT GCTGTGCCTC CTGCTCGCGC TCGTCGCGGA CCTCGTCCTG GTCGCCCTCG GTCGGGCGCT GACGCCGTGG AGCCGCGCCT CGGCCGGCAG GCGGCGCCGG GGGCCCGCGC CGTCCGACGC GCGTGAGGAG GTCGCGTGGG CGTCCTGA
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Protein sequence | MPSGPVLAAA ANPWFSWDYL ERNGSDVLRY TQQHASLTVQ AVLIALVVAL PLAALAHARP RLAAPVLATT GVLYTVPSLA LFAVLAPVTG IGRTTVLVGL VVYALLVLVR NVLVGLQSVD PAVRDAARGM GYGRWRLLLG VELPQAVPAV VTGMRLATVS TVALVTVGVV VGYGGLGQLM FRGFRSNYHA EVMTATVLCL LLALVADLVL VALGRALTPW SRASAGRRRR GPAPSDAREE VAWAS
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