| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cfla_1151 |
|---|
| Symbol | |
|---|
| ID | 9145030 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cellulomonas flavigena DSM 20109 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014151 |
|---|
| Strand | + |
|---|
| Start bp | 1295024 |
|---|
| End bp | 1297318 |
|---|
| Gene Length | 2295 bp |
|---|
| Protein Length | 764 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 80% |
|---|
| IMG OID | |
|---|
| Product | transglutaminase domain protein |
|---|
| Protein accession | YP_003636254 |
|---|
| Protein GI | 296129004 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.301395 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 0.000129974 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | GTGACGCCCG CACCGGGCGC CCAGGGCGCC GACCGCGGCC CCGGCGCGGC CGTCACGCTC
TGGGCCGTCG CGCTGCTCGC GCTGGCGTGC GTCCCCGTCG CGGCCGCGTT CACGTCGCCG
GTCGTGCTGC TCCCGCTCGT CGGGGTCGTC GGCCTCGCGT TCGCCGTCGT GGCGCTCGCG
CGGCGGCTCG CGGTCCCGCC GTGGGCCACC GGCGCCGCCG GTGTGACGCT CGTGCTCGCG
TCCGCGACGT CCCTCGCGCG CCTCGGCGCC GACGCCGCAC CCGTGGCCGA CGCCGACCTC
GACGGTGCCG GCTGGCGGAG CACCGGGGCA GCCCAGCTCC TCGGGCCGCT CGCCGACGCG
GTCGCACGGC TCCTCACAGC GCCGCGGCCC GCCGCCCCCG CGCTCGCACC GCCGGTCGTC
GCGCTCGTCG CACTCGTCGC CCTCACGGTG GCGCTCGCGC TCGGTCGCCG CTCGGCGGCC
CGGGTCGCAC CGCTCACGGG CGCGGTCGTC GTGTACGGCG TCGCGCTGCT GCTCACCGCG
GGCGCCGCCG ACCGCGGCGC GGTGGGGGCG GGGCTCGTCG CGCTCGCCGC CGCCGGCTGG
ATGCTGCTGG ACGGCGAGGC GCTGGCACGC GACGGTGCGC GGCCCCGGCT GGGGCGTGCG
CCGCGCCGGG CCCGCACCCG GTGGCGCAGC AGCGGCGTCG CGGGGCTGCT GGTCGTCGCG
CTCGTCAGCG CCGGGGGTGC TGCGGCCGCC GCGGCCGTCA CCGGGGACGC CTTCGAGCCG
CGTGACCACG TCGCACCGCC GCGTGTGCCG GCCGCCGTCG TGCACCCGCT CGCGGAGCTC
TCGCGCTGGC AGTCCGACGC CGACGCCACC GTGCTGCGCG TGCGCGGCAC GCACCCCGGC
TACCTCACGT GGGTCACGCT GCCCGACCAC GACGGCGCCG GCTGGCATGC CGACCTCGCC
CTGCGCCCGC TCGGGACGGT CGTCGAGCCC TCGCTCCCGC CGGGCGCTGC GCGCGGTGAC
GTGGACGTCG AGGTGCAGCT CGTGGAGATC GCCGGGCCGT CGGGCTCCCC GGGCTCGTGG
CTGCCGGCGA CCGCCGAGGT CGTGGCCTCG GACGCGCCCG GCGTCCTGGC CGACGTGGAC
GCGGGTGTCC TGGCAGTCCC GCCGACGCCC GAGGGGCGGC TGCCGGAGGG GCTCGTCTAC
CGCGTGCGCG GGCACGTCGA CGTGCCCGAC CCCGCGCTCG CCGTGCGCGC CGGCGTGCCC
GGCGGCGAGG AGGTCGAACG GTACCTGCGG CTCGAGCGGT TCCCCGCGGA CCTGCGTGCC
TACGCGCAGG ACGTCGTCGC GGACGCGTCC TCGCGCCTCG ACCAGGCGGA GCGCCTGGCT
GCGACGGTGC GCGCGGACCG CGAGCTGGCG GCCGACGCCG TGAGCGGCAC GTCCTACGCG
CGCCTGCGCG AGTTCCTCTT CGCGGAGCGG GAGGCCGGGG GGCAGGTCGG TACCAGCGAG
CAGTTCGCCG GTGCGTTCGC CGTGCTCGCG CGCGCCGTGG GGTTGCCGTC GCGTGTGGTC
ATGGGCTTCG TGGTGCCCGG TGGCGCCGCG ACGGACGACG AGACGCTGCG CGACGTGCAC
GGGTCCGACG TGCGTGCCTG GGCCGAGGTG TACCTCGCCG GGACGGGGTG GGTGAGGTTC
GACCCGGCGC CGGACGCCGT GACGACGTCG GCCGTCGACC AGGTGCCGCC CGAGCAGCAG
GAGCAGACCG CCACCCAGGA CGACCCGCCG CCGGTGCCGG AGGACGAGCA GCCGCAGGAA
CCCGCGACGC CGCTGCCCGG AGGGCAGGAC CGGCGGGTGG ATCCCGCCGT CGTGATCGTG
GCTGCCGCGG CGACGCTCCT GCTGGCCGCG CTCGGGGCGT GGCTCGCCGT GCTGGGTGCG
CGCCTCCTGC GCCGTGGCCG GCTGCGCCGT GCCGGTGCCG TCGGGGCGTG GCAGCACGCC
GCCGACGCGC TGCTGCTGCG CGCGGGTGCG CCGGCGCCGG GCGAGACAGC CGACGACCTC
GCGCGGCGCA TGACCGAGCT GTGCGGCGTG CCCGCCCACG GGTTGGCCAC CGCCGCGCAG
GCCGTCGCGT TCGGGGCCTC ACCCGTGCCG GCGCCGGGCG CGTGGCGCAC GGCGGTGCAG
GTGCAGCGCC GGCTGCGGGC GGGTGCGCCT CTCGGCCGGC GGCTCACCTG GTGGGCGGAC
CCCGCGCCGC TGCGACGGCG TGCGGGCACG GGCGGGCGAG GCGCAGGGCA CCGACCGGGG
CCGTCACGGC GGTGA
|
|---|
| Protein sequence | MTPAPGAQGA DRGPGAAVTL WAVALLALAC VPVAAAFTSP VVLLPLVGVV GLAFAVVALA
RRLAVPPWAT GAAGVTLVLA SATSLARLGA DAAPVADADL DGAGWRSTGA AQLLGPLADA
VARLLTAPRP AAPALAPPVV ALVALVALTV ALALGRRSAA RVAPLTGAVV VYGVALLLTA
GAADRGAVGA GLVALAAAGW MLLDGEALAR DGARPRLGRA PRRARTRWRS SGVAGLLVVA
LVSAGGAAAA AAVTGDAFEP RDHVAPPRVP AAVVHPLAEL SRWQSDADAT VLRVRGTHPG
YLTWVTLPDH DGAGWHADLA LRPLGTVVEP SLPPGAARGD VDVEVQLVEI AGPSGSPGSW
LPATAEVVAS DAPGVLADVD AGVLAVPPTP EGRLPEGLVY RVRGHVDVPD PALAVRAGVP
GGEEVERYLR LERFPADLRA YAQDVVADAS SRLDQAERLA ATVRADRELA ADAVSGTSYA
RLREFLFAER EAGGQVGTSE QFAGAFAVLA RAVGLPSRVV MGFVVPGGAA TDDETLRDVH
GSDVRAWAEV YLAGTGWVRF DPAPDAVTTS AVDQVPPEQQ EQTATQDDPP PVPEDEQPQE
PATPLPGGQD RRVDPAVVIV AAAATLLLAA LGAWLAVLGA RLLRRGRLRR AGAVGAWQHA
ADALLLRAGA PAPGETADDL ARRMTELCGV PAHGLATAAQ AVAFGASPVP APGAWRTAVQ
VQRRLRAGAP LGRRLTWWAD PAPLRRRAGT GGRGAGHRPG PSRR
|
|---|
| |