| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cfla_0953 |
|---|
| Symbol | |
|---|
| ID | 9144828 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cellulomonas flavigena DSM 20109 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014151 |
|---|
| Strand | - |
|---|
| Start bp | 1048238 |
|---|
| End bp | 1051030 |
|---|
| Gene Length | 2793 bp |
|---|
| Protein Length | 930 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 79% |
|---|
| IMG OID | |
|---|
| Product | protein of unknown function DUF214 |
|---|
| Protein accession | YP_003636059 |
|---|
| Protein GI | 296128809 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.144444 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.0504476 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGTGC TCGCCACGCG GACCCGCGCG ACGACCGGGG CCGCGCTGCT CCTCCCGCGC
CGCCGCGCCC GGCAGGACGC CGGCCTGCTG CTGGGCACCG CGCTGCTCCT GGCAGGCGCG
CTGCTCGCGC TGCTCGCGGC GCCGCGCCTG CTCGACCGCA CGGCCGACGA GGCCCTGCGC
ACGGCGGTCG CCCACGCCGG CGCCGACGCC GGGGTGACCC TGCGGGGTGC CTCGCCGAGC
GACGCCGCAC CCCCCGGTGC ACCGTTCGAC GAGCTGGTCC AGCAGGCGCG GTGGATCGAC
GCCGAGGTGG ACCTGATGCT GCCCGCCACC GCTGTCGGCC GCTCCGCGCC CTACCGCACG
GTCCTCGACG GTCGCAGCGC GTTCGCGGAC GGCGGGCCGG ACGGCGTCGT GCTCGCCACG
CGTCTCGTCA CCGTCAGCAC GCCGTCGGAC CCCGCGGACC CCGTCCGCTG GGTCGCCGGT
CGCGTGCCCG AGGCGGCCGA CCCCGGGACC CCGGAGGACC CGCGGCCCCC GACCGTGCAG
GTCGGTCTGC ACGTCGACGC GGCGCGCGAG CTCGGTGTGG ACCCGACCCT CGCCCCGGTC
AGGCTGCGCA TCGGCACGCG GACCAGCTAC CAGACCGTCG ACGTCACCGG CCTGTACGAG
GCCGTCGACC CGCAGGACCC GCACTGGGCG CGCGTCCCCG AGCTCCTGGG CCCGGTCGCG
ACGCCGACGT CCGAGGAGAC GCCCCTGCTC GTCGGGCTGT ACGTCGTGCC GGACGCCGTG
AGCGACATGG CCCGCGTGAT GGGCACGGGG CGGCTGCCCG GCTCCGCGCT GGCCCTGCCG
GACGTCGACC GGATCACGAC GGCGGACGTC CCGTCGCTGC GCCGCGACGT CGTGTCGTTC
CTCACCACCG AGAAGGGCGC GTCGAGCGGT CTGCCCGCCG TGCTCGACGC GTTCGCCGCG
CACCTCGGCG CGGCGCGCGC ACAGGCCGCC CTCGTGCTCG CGGGACTCGG GGCGACCGCC
GCCTGCTGCC TCGTGCTGGC CGCGGCTCTG CTCGTCGAGC GCCGCCGCAC CCACCTCGCG
GGCGAGCGGG CCCGGGGCGC GTCGCTCGCG TCGGTCGCGC TGCGGGGTGC GGTCGAGTCG
CTGCCGCTGG CCGCGCTGGC CGCGGCCGTC GCGTGGACCG CTGTCACCGT GTGGCTGCCG
CGCGCCGCCG CCGGGACCTG GCTGCCCGTC ACGGTGACGC TGGTGGCGGC CGCCGCGCCC
GCGGTGCTCG CCGCGCGCGC CGCGGGCGCG GCCTGGGCGG GCCGGCGCGT CCCGGCGGAC
CGTCGCGAGC GGGCGCGGCT CGCCGGCCTG CAGGCCGCCC GCCGCCTGCT CGTCGAGCTC
GTCGCGGTGG CCGTCGCGGT CCTCGCACTG GTCTCGCTGC GCGGCCGGGG CCTGGTGCCC
GCGACGGGCG CCTCGGCCGA CCCGCTGCTC ACGTCCACGC CGTTCCTGCT CGCGGTCGCC
GCGTCGTTCG CCGTGGTGCG CGTGGCGCCC GCGGTGGTGC GTGCCGTCGG CCGCTGGACC
ACGCGGACCC GCGGCCTCGC CGGCCCCCTC GCCGCGACCC GCGCGCAGCG GGCCGCGACG
TCGCTGCTGC CGCTCGTGTC GGTCACGGTC GCCGTGGCGC TGATGGTGCT GTGCGGTGTG
CTCGTGCAGA ACGTGCGGGA CGGCCAGCAG GTCGCGGCCG ACCGGCTGGT GGGGGCCGAC
GTGCGCGTCG ACGGCGCGCT CGAGAGCGAC CGGGCCGCGG CGGCGCTCGA CGCGCTGCGC
GCCGCACCGG GCGTCACGGC GGTCGCGACC GGTGCCCAGC TCACCGAGCG CACGATCGGG
CGCGACCTCG ACCTGGCTGC GACCGTGCTG GTGGTCGACG CGCCCGAGCT CGCGCGCGTG
CGCCAGGCGG TCGGGCTGCC CGTCGACCCG CGGCTCGACG CGCTGCGTGT GCCCGGGGGC
CTCGGGCCGG ACGACCTGGT GCCCGTGCTC GTCGACCCCG ACCTGCTGCC GCGTCTGGGC
CGCACGCAGG ACCTCCTGCT GCAGGTCTAC ACGCGGCACG TCGACACCGA GGTCGTCGGC
ACCACCGCGC TGACCCCCGA CAGCGGCGCG CCGCCCGTCG ACGCGCGCGC CGCGGGGGCG
TCCGTGACGG GCGACGACGG GGTCGCGGTC GTCGACGCCG CGACGCTCGC GCCCGTCGCG
GAGAAGATGC CGCCGGTCAC CCGGGCGTGG GTCGCCGGCC CGGGGGCCGC GCAGGCCGTG
GCCGACGCGG GCCTCGCGGA CCTGCCGGGC GTGACGGTGA CGACGCGCGA CGGCTGGTAC
GAGCAGTGGT CGCGGGCACC CATCCCCGGT GCGCTCACCG CCCTGCTGCT CGCGGCGGTC
GGCGCGCTCG CGCTGCTCGC GGTGGTCGCG CTCGCGCTCG TCGTGGTCGC GACGTCCGGG
GAGCGGGGCC GCACGCTGTC GACGCTGCGC ACGCTGGGTC TCGACGCGCG GACGGCGCGG
TGGGCGACGC TCGGTGAGCT CGCGCCGCTG GTGGTCGGCG GGCTGCTCGG CGGCGCCGTG
ATCGGCCTCG CGCTGCCCGT GCTCGTCGGT GACGCGCTGG GGCTCGCGTG GGTGACCGCG
GCGCCCGGGT CCGTGCCCGT CGAGCCGGTC CTGTGGCCGG TGCTGCTCGC GGCCGCGACG
CTCGCGGTGG CGCTCCTGGT CGCCGTGCTC GTCGAGCAGG CCGTGCGGCG GCGCGAGGAC
CTCGGCGAGG TGCTGCGGGT GGGGGCCCGC TGA
|
|---|
| Protein sequence | MTVLATRTRA TTGAALLLPR RRARQDAGLL LGTALLLAGA LLALLAAPRL LDRTADEALR
TAVAHAGADA GVTLRGASPS DAAPPGAPFD ELVQQARWID AEVDLMLPAT AVGRSAPYRT
VLDGRSAFAD GGPDGVVLAT RLVTVSTPSD PADPVRWVAG RVPEAADPGT PEDPRPPTVQ
VGLHVDAARE LGVDPTLAPV RLRIGTRTSY QTVDVTGLYE AVDPQDPHWA RVPELLGPVA
TPTSEETPLL VGLYVVPDAV SDMARVMGTG RLPGSALALP DVDRITTADV PSLRRDVVSF
LTTEKGASSG LPAVLDAFAA HLGAARAQAA LVLAGLGATA ACCLVLAAAL LVERRRTHLA
GERARGASLA SVALRGAVES LPLAALAAAV AWTAVTVWLP RAAAGTWLPV TVTLVAAAAP
AVLAARAAGA AWAGRRVPAD RRERARLAGL QAARRLLVEL VAVAVAVLAL VSLRGRGLVP
ATGASADPLL TSTPFLLAVA ASFAVVRVAP AVVRAVGRWT TRTRGLAGPL AATRAQRAAT
SLLPLVSVTV AVALMVLCGV LVQNVRDGQQ VAADRLVGAD VRVDGALESD RAAAALDALR
AAPGVTAVAT GAQLTERTIG RDLDLAATVL VVDAPELARV RQAVGLPVDP RLDALRVPGG
LGPDDLVPVL VDPDLLPRLG RTQDLLLQVY TRHVDTEVVG TTALTPDSGA PPVDARAAGA
SVTGDDGVAV VDAATLAPVA EKMPPVTRAW VAGPGAAQAV ADAGLADLPG VTVTTRDGWY
EQWSRAPIPG ALTALLLAAV GALALLAVVA LALVVVATSG ERGRTLSTLR TLGLDARTAR
WATLGELAPL VVGGLLGGAV IGLALPVLVG DALGLAWVTA APGSVPVEPV LWPVLLAAAT
LAVALLVAVL VEQAVRRRED LGEVLRVGAR
|
|---|
| |