Gene Ccur_12750 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCcur_12750 
Symbol 
ID8375480 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCryptobacterium curtum DSM 15641 
KingdomBacteria 
Replicon accessionNC_013170 
Strand
Start bp1444560 
End bp1445600 
Gene Length1041 bp 
Protein Length346 aa 
Translation table11 
GC content54% 
IMG OID644994192 
Product4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase 
Protein accessionYP_003151637 
Protein GI256827678 
COG category[I] Lipid transport and metabolism 
COG ID[COG1947] 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase 
TIGRFAM ID[TIGR00154] 4-diphosphocytidyl-2C-methyl-D-erythritol kinase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0472699 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones166 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGACAA TTAATCTTAT TGCACCAGCG AAAGTGAATT TGTTTCTGGG TGTTGGTCGC 
TTGCAGCCCG ACGGTTATCA CGAGGTGACA ACTGTTATGC AGGCCCTTGC TTTGCACGAC
ACGATTCATA TGACGCTGGT TTCCAGCGGC GAGCAGGTTG TGCTGGCAGA ACCGTGCGAC
GAAGCTCAGC CGATACGCGA GCATACGATT GAAGTTCCTG CAGGAAGCGG GCTTTCTGTA
AGCGTCAATA TGCAATGGCG CGAAGGAATT GCTCCCGCAG ACATTACCGA TCAAGATAAT
CTTGCCTGTC GCGCAGTACG TGTACTGGCG CGTTTGATGG GGCGCACTAA CGACGAACAT
GTGCGTCTGG TGATTGAAAA ACATATACCG CCGCAGTCTG GCTTGGGGGG AGGAAGTTCC
GATGCAGCTG CTGCCCTGAT AGGCGCCGCG GCACTGTGGA ATGTTGACCC AACAGACCAG
GTGATTTATC AGGCGGCTCA GGAAATTGGC GCGGATACAG CCTTTTTCTT GCACGGGGGA
AGTGCCCTTT TAGAGGGGCG GGGAGACATT CTTCGTAAGC GATATCGTTC TCGCAGCGAA
CAGGTTGTTA TTATTCGCCC CGCTGAAGGT ATTTCGACCG CACAAGCCTA TCGAACCTTT
GACAAAGCCC CTGTTTATTC GTGTGACGAT ATGCTTGCAG TGCTACACGA TGCGACCGAT
GCGTCTGAGA TTCCGCTTTA CAACAATCTT CAAGCGCCTG CCGAATTGCT CTTGCCGGCA
CTTTCTGACG TGAAGGGCTT CATACGGAAT ACTACGCGAG CGGGTAACGC AGAGGTGAAT
AGCACAGTGG CCGATAGTGC AGGGGAGGAT GATAGTGTGG CGCCAAAGGA TTGCTTGCTT
TGTGGAAGCG GTTCAGCCAC TTTCGTGGTA TGCGAGAGTC TTGAAGCAGC GCACGCACTG
ACTGCCGCTG CTCGTTTAGC GGGGTATTGG GCGCGTGCGA CATCGTTTTC TTCTATTCGC
GCCGCTCAGC TTCCTCGTTA A
 
Protein sequence
MQTINLIAPA KVNLFLGVGR LQPDGYHEVT TVMQALALHD TIHMTLVSSG EQVVLAEPCD 
EAQPIREHTI EVPAGSGLSV SVNMQWREGI APADITDQDN LACRAVRVLA RLMGRTNDEH
VRLVIEKHIP PQSGLGGGSS DAAAALIGAA ALWNVDPTDQ VIYQAAQEIG ADTAFFLHGG
SALLEGRGDI LRKRYRSRSE QVVIIRPAEG ISTAQAYRTF DKAPVYSCDD MLAVLHDATD
ASEIPLYNNL QAPAELLLPA LSDVKGFIRN TTRAGNAEVN STVADSAGED DSVAPKDCLL
CGSGSATFVV CESLEAAHAL TAAARLAGYW ARATSFSSIR AAQLPR