| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ccur_12400 |
|---|
| Symbol | |
|---|
| ID | 8375446 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cryptobacterium curtum DSM 15641 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013170 |
|---|
| Strand | - |
|---|
| Start bp | 1408679 |
|---|
| End bp | 1409719 |
|---|
| Gene Length | 1041 bp |
|---|
| Protein Length | 346 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 644994158 |
|---|
| Product | periplasmic component of amino acid ABC-type transporter/signal transduction system |
|---|
| Protein accession | YP_003151606 |
|---|
| Protein GI | 256827647 |
|---|
| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 129 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCAGA GAGTTTCGTT GCTGGCTGTT GTGTCAGCCT TGCTTATCGC CGTGCTTGGT
CTGTGTGGAT GTGCACAGGT GTCGGAACTT TCTTCGTCTC TTTTTGGTAA GCCGTATACC
CCTGAAAAAC TGCAGCCAAC AGTATCGACA CCAACTATCG GCAAAGAAGG GGTTCTGCGC
GTCGGCGTTG ATGCGTCGAA TGCTCCCTAT TCGACGCAGG TGTCAGGCAA GCTTGCTGGC
ATCGATGTCG ACATGGCGGC AGCGCTTGCT GCACAGATGG GCTTGTCACT TGAGTTGGTT
GATGTCGGAA GTGATGCCGA AGGGGCGCTT AAGGCAGGTA CCGTGGACGT GGTGATGAGC
ATGGACTCAT CCGATTCGTC GTCTTCTTAT TGGCTTTCAG ACCCCTATTT GCAGACGTGC
GTGGCTCTTT TTTCGAAAGG TCAAGCATCT TCTGTGCCAA GTGCTTCTAG TTCGGTAAGC
ATCGAAGCGC AGGCCGCTTC CATGAGCGCC TGGGAAGTTT CAAATCAATT CGGTGACGAG
GCGCTGAAGA CCGTGCCCGA TTTGAAAACT GCGTTTTCTG ATTTGAATGA CGGTAAAGTT
GATTATGTTG CGGCCGATGC CGTTATTGGT GTCTACATTA CGCACACGAC TCACAGTGAT
GTCCATATTA CTGCACTTAT GCAGAAGGTT TCTGGTCGCT CTATTGGTGT TTTGAGCTCG
AATGACGAAC TGAAGAAAGC GGTCTCCGAT GCCCTTGATG CCATCAATTC GGGTGGCATT
GGCAGCATTA TTGAAGCGAA ATGGCTAGGA AGTGCCCTAT CGCTCGATCA ATATTCTCAG
ACAGCAACCG CACAACGCGC CTCATCGAAG ACTTCAGGAA CAGCTTCGTC TACCAATTCT
GCTGCTTCAT CGTCTACCAC AGAGTCCTCT TCGGATTCCT CTTCTGGGAC ATCAACGTCT
TCCACTGAAG CAACAACTTC GTCCGATTCT TCTAATTCTG GTTCTGCCAC CGCTAATCCC
AATAGCTCTT TGGCAGCTTA A
|
|---|
| Protein sequence | MKQRVSLLAV VSALLIAVLG LCGCAQVSEL SSSLFGKPYT PEKLQPTVST PTIGKEGVLR
VGVDASNAPY STQVSGKLAG IDVDMAAALA AQMGLSLELV DVGSDAEGAL KAGTVDVVMS
MDSSDSSSSY WLSDPYLQTC VALFSKGQAS SVPSASSSVS IEAQAASMSA WEVSNQFGDE
ALKTVPDLKT AFSDLNDGKV DYVAADAVIG VYITHTTHSD VHITALMQKV SGRSIGVLSS
NDELKKAVSD ALDAINSGGI GSIIEAKWLG SALSLDQYSQ TATAQRASSK TSGTASSTNS
AASSSTTESS SDSSSGTSTS STEATTSSDS SNSGSATANP NSSLAA
|
|---|
| |