Gene Ccur_10880 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCcur_10880 
Symbol 
ID8375295 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCryptobacterium curtum DSM 15641 
KingdomBacteria 
Replicon accessionNC_013170 
Strand
Start bp1236280 
End bp1237353 
Gene Length1074 bp 
Protein Length357 aa 
Translation table11 
GC content53% 
IMG OID644994010 
Productpredicted membrane-associated Zn-dependent protease 
Protein accessionYP_003151461 
Protein GI256827502 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0750] Predicted membrane-associated Zn-dependent proteases 1 
TIGRFAM ID[TIGR00054] RIP metalloprotease RseP 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones157 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGTTG TCCTTATGAT CCTTTATGGC GTGTTGGTCT TGGGCTTTCT GGTGGTTATT 
CACGAGGGAG GCCATTATTG TGCCGCGCGC GCATTTGGCG TGCGTGTCAC TGAATTTATG
GTTGGTTTGC CTGGTCCGCG CATTGGTTTT TTGCATCATG GCACGCGTTT CGGTGTCACG
GCGATTCCGT TAGGCGGGTA TGCGCGCGTG TGTGGCATGG AAGCAGGCGA GGAAAGCCCC
CATCTGCGGC GGATGCTGGC GCTGGTTTAT GAACGCGGCG AAGTGCTCAT GGAAGATGCA
GCCCGTACCC TTTCTATCAG CGACGATGAA GCTTATCGTG CGCTCGACGA GCTAGCCGAA
TGGGGCAGTA TTATACCGCC GCAGCGCCGT GACAAGTACA ATATCTATCG GGCACCTTCA
TCTGCCCAAG CGTGTGATGG CGGCTCGTAC GCTGAAGGGG AGGCTCGTCC TCTTGCCGAC
CCAGCGGCAA TGTTTGCCCA TGAACGATCT CAACAGTATC GTGCTCTGCC GTTTTGGAAG
CGCTGCGTTA TTCTGTTGGC TGGTCCGCTG GTAAATATCT TGTTTGCACT TATCGTTTTC
GTTGTGCTCT ATTCGCTCAT TGGCTTCGAT GCGGTTAATG CTCAGGGCGA AACCGTCCAT
GTGCAGGTTG GTCCGCTTCG TGCGCTTTCA GCAGGGTTCA GCTACATTGG CATGGTGATT
GCAGCAGTCG CGGGGCTCTT CAACCCACAA ACCGCGGCGG AAACGGTTTC GAATTCTACA
TCGGTTATGG GCATCGCCGT GCTTTCCAAA TCGGCCGCCG ATGCAGGCTT TATGTCGCTA
TGCATGTTTA CTGCGATGAT TTCAGTTTCG TTGGGCGTTA TGAATCTGCT GCCTATTCCA
CCGCTTGATG GTGGTCGTTT TGTAGTTGAA ATTTACCAGA AGATACGCCG TCGCACGGCG
AGTGTGCGTG CGGTTAATGC GCTTTCATTG GCGGGTATGG CGTTATTTGG ATTGCTGTTT
ATTGTCATGA TTGGACAAGA TATTCAACGT TTTGTCTTAG GAACGATCAG CTGA
 
Protein sequence
MDVVLMILYG VLVLGFLVVI HEGGHYCAAR AFGVRVTEFM VGLPGPRIGF LHHGTRFGVT 
AIPLGGYARV CGMEAGEESP HLRRMLALVY ERGEVLMEDA ARTLSISDDE AYRALDELAE
WGSIIPPQRR DKYNIYRAPS SAQACDGGSY AEGEARPLAD PAAMFAHERS QQYRALPFWK
RCVILLAGPL VNILFALIVF VVLYSLIGFD AVNAQGETVH VQVGPLRALS AGFSYIGMVI
AAVAGLFNPQ TAAETVSNST SVMGIAVLSK SAADAGFMSL CMFTAMISVS LGVMNLLPIP
PLDGGRFVVE IYQKIRRRTA SVRAVNALSL AGMALFGLLF IVMIGQDIQR FVLGTIS