Gene Ccur_10200 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCcur_10200 
Symbol 
ID8375227 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCryptobacterium curtum DSM 15641 
KingdomBacteria 
Replicon accessionNC_013170 
Strand
Start bp1157212 
End bp1157985 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content49% 
IMG OID644993942 
ProductABC-type multidrug transport system, permease component 
Protein accessionYP_003151393 
Protein GI256827434 
COG category[V] Defense mechanisms 
COG ID[COG0842] ABC-type multidrug transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0158104 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones96 
Fosmid unclonability p-value0.0492855 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACGC TTAGGAAATT CTTAGCAGTC GTTCGACTGA ATATTCGTCT TCAACTTATG 
GATCCAACTT CAACCCTGCT TCTCACCGTT ATCCCTCTTG TTTTGATACC GTTTATGGAA
CCCGCTTTTA AGTCTATGCT TCTGGCGGAT GGTTATACAA ACGTCACTGG AGCAGAACAA
GCTATGCCTG GTATGGCGGT ACTTTTCTCG TTCCTCTCGG TGCAAACCAT TATTCAGTCT
TTCTTCCGCG AATACACCTG GGGTATGTGG CCGCGCCTCG AAGTGTCCGC GACCTCTCAT
GGTGTCATAC TGGCAGGAAA AGCCCTTGTA GCTTTTCTTA TTCAGTCGGT ACAGGTATTG
GCAGTTCTGG CGCTGGGAGC TCTTATTTTT GGCTATCGAC CCACTGGAGA TACTGGCGCG
CTCATTCTCG TGATTCTCTC ATTTGCTGCA GTGCTTGCCG CCTTAGGTGT CACGATTGCC
CTGTGGGCAC CAACAGAAGA TATAGCTCTG TCTCTTTCCA ACATTGTGGG CATGCTTGCA
GCAGGAATCG GCGGTTCGTT TTGCACCGTA TCGAGCTTTC CCGAATGGGC TCAGGCAGTA
TCAAAATTCT CGCCAGCTTA TTGGGCTCTT GACGCAGTTC ATGCGGTCAG TTTGGATGGC
GCTGGCGTGT CTGGTGTACT GCCTCAAATC GGTATGCTTG GCGTGTTCCT TACAATACTC
GTTGCCCTTG TGGTGATACA ATTCGCAATC AAGAAAGGTC TGCAGTCGCG TTAA
 
Protein sequence
MKTLRKFLAV VRLNIRLQLM DPTSTLLLTV IPLVLIPFME PAFKSMLLAD GYTNVTGAEQ 
AMPGMAVLFS FLSVQTIIQS FFREYTWGMW PRLEVSATSH GVILAGKALV AFLIQSVQVL
AVLALGALIF GYRPTGDTGA LILVILSFAA VLAALGVTIA LWAPTEDIAL SLSNIVGMLA
AGIGGSFCTV SSFPEWAQAV SKFSPAYWAL DAVHAVSLDG AGVSGVLPQI GMLGVFLTIL
VALVVIQFAI KKGLQSR