| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ccur_09540 |
|---|
| Symbol | |
|---|
| ID | 8375161 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cryptobacterium curtum DSM 15641 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013170 |
|---|
| Strand | - |
|---|
| Start bp | 1097068 |
|---|
| End bp | 1098552 |
|---|
| Gene Length | 1485 bp |
|---|
| Protein Length | 494 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 644993876 |
|---|
| Product | UDP-N-acetylmuramyl-tripeptide synthetase |
|---|
| Protein accession | YP_003151332 |
|---|
| Protein GI | 256827373 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0769] UDP-N-acetylmuramyl tripeptide synthase |
|---|
| TIGRFAM ID | [TIGR01085] UDP-N-acetylmuramyl-tripeptide synthetase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 95 |
|---|
| Fosmid unclonability p-value | 0.0675857 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTATGA CCTGCAGGGA ACTATTCGAA GGCATCGATT GCACGTTTTT AGGAAACGCC
GATGAACCGG TAAGCGGCAT TGCTTATCGC AGCGATGCTG TTACAGCAGG CGATGCGTTT
TTCTGCATTG TCGGTACCAA CGTCGATGGG CACTCATTTG CCCAGGATGC CATTGATCAT
GGCGCCCGCG TTATCGTGGC ACAACGCAAG GTATACCTTG CCGATGCAAC TGACGTGGTG
GAAATAATCG TTTCCGACAC TCGTCGCGCT ATGGCCGCCG CCGCTGCTAA TTTCTATGGG
CATCCGTCGA CTGATTTCCA TCTTGTTGGT ATTACCGGCA CGAACGGCAA GACAACTACG
ACATATCTCG TTGAACACAT CGCGGAGGTT GCTGGCCGAA CAACCGGTGT TATTGGCACG
GTAGGCAACC GTATTGCGGG GCGCTTGGAA CATGCCGAGC GCACGACACC TGAATCGGTC
GATTTGCAGC ACTTATTTGC TCGTATGCGT GATGCCGGTT GCGATACAGT GGCCATGGAA
GTAAGTTCAC ACGCGCTCGA CCTTGAACGT ACGTGGGGTA CGCATTTTGC CGTTACCGCG
TTTTCAAACT TAACGCAGGA TCATCTGGAC TATCACAAGA CGTTCGAGGC ATATTTTGAA
GCGAAAGCAC TGCTTTTCTC GTCGGACTAT CCTGCGCGTC GTGTTATCTG TATCGATGAC
AAATGGGGTC AGGAACTGCT GCGTCGTTGT GCGGCAGCGG GCGACCGTAT TCTTTCCGTT
GGGTTTGATC CAGCGGCTCA GATTCATCCG GTAAGCGTAA AGTACGCTAC CACTCACACC
GATGTTGTTC TTGATGTACG GGGGCAAGAA TATTCGCTGA CCTATCCACT GGTCGGGCGT
TTCAATGTGT CGAATGTCAT GCTTGCTCTT GGCATTGGCT TAGAGTTGGG TATTCCTATT
GAAGTGGTCT TGCGAGCTCT GTCTGAATCG CCGCAGGTAC CTGGCCGCTT GCAGCGAATC
TCTGCTGTTC ACGATGGCGG CATTTCAGTA TTTGTTGATT ATGCTCACAC ACCTGATGCC
TTGCGAAAGG CAATTTCAGC GGTTGCGAAC TTGACAGACG GTCGCGTGAT CGTTGTATTC
GGTTGTGGCG GCGATCGCGA TGCTACTAAG CGTCCCTTGA TGGGGCAGGC GGCTCTCAGC
GGCGATTTCG CCGTGGTAAC CTCCGATAAT CCACGGAGCG AAGACCCTGA TGCCATCATT
AGTGACATCC TCGAGGGGAT GGAAAGCGCT TCTGAGCGCT TTGAAGTACA TCCCGATCGC
CGTGAAGCTA TTGCCCGTGC TATTGCGCTC GCAAATACGG GGGATGCAAT TCTGGTAGCT
GGAAAAGGGC ACGAGGATTA TCAAATACTC GCCACTGAAA CCATTCACTT TTCTGATGCC
GAAGTGGCTG GCGAAGAGTT GGAAAACGCT TTCGGCAGTC GGTAA
|
|---|
| Protein sequence | MAMTCRELFE GIDCTFLGNA DEPVSGIAYR SDAVTAGDAF FCIVGTNVDG HSFAQDAIDH
GARVIVAQRK VYLADATDVV EIIVSDTRRA MAAAAANFYG HPSTDFHLVG ITGTNGKTTT
TYLVEHIAEV AGRTTGVIGT VGNRIAGRLE HAERTTPESV DLQHLFARMR DAGCDTVAME
VSSHALDLER TWGTHFAVTA FSNLTQDHLD YHKTFEAYFE AKALLFSSDY PARRVICIDD
KWGQELLRRC AAAGDRILSV GFDPAAQIHP VSVKYATTHT DVVLDVRGQE YSLTYPLVGR
FNVSNVMLAL GIGLELGIPI EVVLRALSES PQVPGRLQRI SAVHDGGISV FVDYAHTPDA
LRKAISAVAN LTDGRVIVVF GCGGDRDATK RPLMGQAALS GDFAVVTSDN PRSEDPDAII
SDILEGMESA SERFEVHPDR REAIARAIAL ANTGDAILVA GKGHEDYQIL ATETIHFSDA
EVAGEELENA FGSR
|
|---|
| |