Gene Ccur_08720 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCcur_08720 
Symbol 
ID8375080 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCryptobacterium curtum DSM 15641 
KingdomBacteria 
Replicon accessionNC_013170 
Strand
Start bp999432 
End bp1000673 
Gene Length1242 bp 
Protein Length413 aa 
Translation table11 
GC content52% 
IMG OID644993794 
Productpredicted acyl-CoA transferase/carnitine dehydratase 
Protein accessionYP_003151255 
Protein GI256827296 
COG category[C] Energy production and conversion 
COG ID[COG1804] Predicted acyl-CoA transferases/carnitine dehydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones107 
Fosmid unclonability p-value0.372982 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAAAGC CTCTTGAAGG TGTAAAGGTC ATCGATCTCA CGACATTTCT TGCAACCCCC 
ACCACCGGAC GGGTGCTCGG CGAATGGGGT GCCGACGTTA TCAAAGTTGA AGCAGCAAAG
GGCGATCCGG GCCGCGTTAA TCAGGCAGCC GTATTCGGTA TGCCTTCTTC AGACGAGGAA
AATCTTGGCT TCGACATGGC CAATATGCAT AAGCGCTTTA TCAGTTTGAA TCTGAAAAGC
GAAAAGGGTC TCGAGGTTAT GAATAAGCTT CTTGCCGATG CTGATATCTT TATCACCAAT
AACCGCGCAA AGAGCCTGGC AAAAATGGGG CTTGACTGGG AAAGCCTCCA TGCGAAGTAT
CCACGCCTCA TCATGGGTCA TGGCCTGGGA TATGGCAAGA AGGGTCCTGA AAAGGATAAT
GCTGGCTTCG ACGTAACCTG CTATATGGGT CGCGGCGGCG TATTTGGCAC AACGGTTGAC
AAAGACAGTT TCCCCATGAT CCCCACCAAT GGCTATGGTG ACTTTCAAGC TTCGATGTTT
TTGGCTGCAG GACTCTTGGC CGCCTATATC GCCCGCGAGA AATCTGGCGA AGGTGACTAT
GTAACCTGCG CGCTGCAACA CGCGGCCATC TATGCCCTGT CAACCGGTAT GGTATCAGCC
CAGTATGGCA ACCCCTACCC CAAGAGTCGC CTCGAAGTAA ACAACCCCTT AAACAACGTG
TTTAAGTCCA GCGACGACCA ATGGGTTGTG CTGTGCTTGC CTGAATATGA CCGCGACTGG
CCTCGGGTAC TCAAGCTTAT CGGCCGTGAA GATCTGCTCG ACCGCACTGA CCTCGCAAGC
ATTGAATCGG TAAATGCCAA GGGACTCTCG CCAGAGGTTG TTCGCATCCT TGATGACGGA
TTCGCTCAAT TCACCCGCAG CGAACTGCTG ACTATGTTTA CCGAAAACGA TATGCCCTGC
GAACCTGCTC AGGTACCTGC TGATGTATAT GAAGACCAGA ACGCACTCGT TAATGAATAT
ATCGCACAGG TTCCTTACCC GAGCGGTGGC AAGTGGTGCC CAACCGCACC AGTTCAGTTT
GAGGTAAGCG AAACAGCTGC GCTTGCACCC ACCGGAAAAC TGGGATCTTC AACCGAAGAC
GTTATGCGTG AACTGGGCTA TAGCGACGAT GAAATCAAGG CAGCCGAATC TGATGGATCA
GTTTGCGGTG CGGTTGATCT TGCCGTTCTG CAGGGAAAGT AA
 
Protein sequence
MSKPLEGVKV IDLTTFLATP TTGRVLGEWG ADVIKVEAAK GDPGRVNQAA VFGMPSSDEE 
NLGFDMANMH KRFISLNLKS EKGLEVMNKL LADADIFITN NRAKSLAKMG LDWESLHAKY
PRLIMGHGLG YGKKGPEKDN AGFDVTCYMG RGGVFGTTVD KDSFPMIPTN GYGDFQASMF
LAAGLLAAYI AREKSGEGDY VTCALQHAAI YALSTGMVSA QYGNPYPKSR LEVNNPLNNV
FKSSDDQWVV LCLPEYDRDW PRVLKLIGRE DLLDRTDLAS IESVNAKGLS PEVVRILDDG
FAQFTRSELL TMFTENDMPC EPAQVPADVY EDQNALVNEY IAQVPYPSGG KWCPTAPVQF
EVSETAALAP TGKLGSSTED VMRELGYSDD EIKAAESDGS VCGAVDLAVL QGK