| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ccur_08610 |
|---|
| Symbol | |
|---|
| ID | 8375069 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cryptobacterium curtum DSM 15641 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013170 |
|---|
| Strand | - |
|---|
| Start bp | 986474 |
|---|
| End bp | 987184 |
|---|
| Gene Length | 711 bp |
|---|
| Protein Length | 236 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 644993783 |
|---|
| Product | HAD-superfamily subfamily IB hydrolase, TIGR01490 |
|---|
| Protein accession | YP_003151245 |
|---|
| Protein GI | 256827286 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0560] Phosphoserine phosphatase |
|---|
| TIGRFAM ID | [TIGR01488] Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like
[TIGR01490] HAD-superfamily subfamily IB hydrolase, TIGR01490 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 107 |
|---|
| Fosmid unclonability p-value | 0.294075 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTCATT CTGCGCATGA TGCGCCGTCT CAACCGGACA GTCCGGTTCA GTTGGCAGTC
TACGATTTTG ATGGTACGAG TATCACGGGT AATTCTCCCG TTATGCTGGT GCGGTATCTT
CTGCGTAATC GTCGCCTTCG CTTAACCGCA GGTTTGCGTA TTGGTCTGTG GGCATTGCGC
TATAAACTGC GTTTACCGCA AAACGAAAGC TGGGTGCGCT CTCAGGTTTT TAAGGCGTTT
GCCGGTGAAC CGAAGGCCGA AGTCGATGCC TACCTTTCTC ACTTTTACGA CGAAGAAGTG
GCATCCTGTT TCCGTGAGCA AGCCGAACAG AGTATGCGTG CTCATACACA AGCAGGTCGT
ACGGTGGTTG TCGTTTCAGC AAGTTGGGAG CCTATTGTTA AGCGAGCTCA GCAAAATCAT
TCGTTTGATT TACAGACATC GACGCGCATG CATGTCGATG CAGCAGGACG CTACACTCGC
CAAGTCGAAG GTTTACCAGT GGAGGGCGCT GAAAAAGTCG CTGCGCTTAC CCGGCTTGCT
GATAAAACAT TTGGCCCCGG AGGTTGGGTT GTTACGCATG CTTATGGCGA CCATCATTCC
GATTTACCGC TCTTGCGCAT GGCCGATCAT CCCTATGCGG TAACGCCCGA TAATCCGCTC
GAGCGTGAGG CAAAGCGGCA GGGCTGGCCC ATTCTTGACT GGAATTCCTG A
|
|---|
| Protein sequence | MSHSAHDAPS QPDSPVQLAV YDFDGTSITG NSPVMLVRYL LRNRRLRLTA GLRIGLWALR
YKLRLPQNES WVRSQVFKAF AGEPKAEVDA YLSHFYDEEV ASCFREQAEQ SMRAHTQAGR
TVVVVSASWE PIVKRAQQNH SFDLQTSTRM HVDAAGRYTR QVEGLPVEGA EKVAALTRLA
DKTFGPGGWV VTHAYGDHHS DLPLLRMADH PYAVTPDNPL EREAKRQGWP ILDWNS
|
|---|
| |